| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 102892 |
| Family | GH28 |
| Protein Properties | Length: 221 Molecular Weight: 24067.1 Isoelectric Point: 4.0165 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 57 | 212 | 1.5e-34 |
| SSTVLFPATYSFVIGPVELSGPCADYITLRVDGTIMARDDLSNWNVDLDGWLVFSGLQLFRLTGYGVIDGRGDFWWAYSCKIYPFASVLLRRISAVEISY LTLKDSQEFHLSVESCNEVYMTGLQVVAPSDSPNTDGIHIVRSENVYLQDTLIGTG | |||
| Full Sequence |
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| Protein Sequence Length: 221 Download |
| MAIAIAFASV GSALEDSDFL FVPPVFDVTS FGALGDGETD DSQAFLSAWE AACFVPSSTV 60 LFPATYSFVI GPVELSGPCA DYITLRVDGT IMARDDLSNW NVDLDGWLVF SGLQLFRLTG 120 YGVIDGRGDF WWAYSCKIYP FASVLLRRIS AVEISYLTLK DSQEFHLSVE SCNEVYMTGL 180 QVVAPSDSPN TDGIHIVRSE NVYLQDTLIG TGNRSKFSRC * 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03010 | PLN03010 | 3.0e-36 | 26 | 213 | 192 | + polygalacturonase | ||
| PLN03003 | PLN03003 | 3.0e-36 | 26 | 213 | 190 | + Probable polygalacturonase At3g15720 | ||
| PLN02218 | PLN02218 | 8.0e-42 | 20 | 213 | 205 | + polygalacturonase ADPG | ||
| PLN02188 | PLN02188 | 8.0e-44 | 24 | 213 | 199 | + polygalacturonase/glycoside hydrolase family protein | ||
| PLN02793 | PLN02793 | 1.0e-47 | 25 | 213 | 198 | + Probable polygalacturonase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF32143.1 | 2.00386e-43 | 25 | 213 | 28 | 225 | pollen allergen [Chamaecyparis obtusa] |
| RefSeq | XP_001768642.1 | 8.96831e-44 | 25 | 213 | 23 | 224 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002299032.1 | 0 | 25 | 213 | 62 | 258 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002317091.1 | 1.4013e-45 | 25 | 213 | 33 | 229 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002328587.1 | 0 | 25 | 213 | 63 | 259 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3jur_D | 0.0003 | 27 | 137 | 29 | 148 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_C | 0.0003 | 27 | 137 | 29 | 148 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_B | 0.0003 | 27 | 137 | 29 | 148 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 3jur_A | 0.0003 | 27 | 137 | 29 | 148 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2103 | EC-3.2.1.15 | polygalacturonase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FE686036 | 197 | 25 | 213 | 0 |
| DT763022 | 197 | 25 | 213 | 0 |
| EH732884 | 198 | 25 | 213 | 0 |
| DT763022 | 197 | 25 | 213 | 0 |
| FE686036 | 197 | 25 | 213 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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