Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 105931 |
Family | GH79 |
Protein Properties | Length: 506 Molecular Weight: 55516.9 Isoelectric Point: 6.6619 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH79 | 18 | 498 | 0 |
SENFICATLDWWPPEKCDYGYCSWGRASLLNLDLWNPRLVNAVKGLSPLLLRLGGSLQDQIIYEVGVRPGPCLPLQKQPSAMFGFTGGCLNMSRWTELNS FFEKTGALVAFGLNALYGRTKFEDNGFKGSWKSSNARDLMKFSLDHGFPIVAWELGNELSGSGVGTSISAKQYAADIKELRSVVDQVYARSTIKPQVVAP DGFWDYGWFHDFLQSTGPNVVNACSHHIYNLGPGVDTHLIEKIVSPSYLSQEAGTFEGVEKLMKAYGTEAWVGEAGGAYNSGHHNVTDRYVFSFWYLDEL GMSAYYNTAVYCRQSLIGGNYGLVDRTSYDLNPDYFSALLWKKLMGRNVFSATAENTPYLRTYAHCLKSNQQGGLTVLIINLSNSTQYSVDLSLTHSEKD CSCNKPRTKKLAGAGVNAERMEYHLTAPNGDLQSPVMLLNGKPLVAGADGSIPELTPVTRTSSSPVLVDPYSIVFAVIPEA |
Full Sequence |
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Protein Sequence Length: 506 Download |
MQRVVLQINT TSPVARISEN FICATLDWWP PEKCDYGYCS WGRASLLNLD LWNPRLVNAV 60 KGLSPLLLRL GGSLQDQIIY EVGVRPGPCL PLQKQPSAMF GFTGGCLNMS RWTELNSFFE 120 KTGALVAFGL NALYGRTKFE DNGFKGSWKS SNARDLMKFS LDHGFPIVAW ELGNELSGSG 180 VGTSISAKQY AADIKELRSV VDQVYARSTI KPQVVAPDGF WDYGWFHDFL QSTGPNVVNA 240 CSHHIYNLGP GVDTHLIEKI VSPSYLSQEA GTFEGVEKLM KAYGTEAWVG EAGGAYNSGH 300 HNVTDRYVFS FWYLDELGMS AYYNTAVYCR QSLIGGNYGL VDRTSYDLNP DYFSALLWKK 360 LMGRNVFSAT AENTPYLRTY AHCLKSNQQG GLTVLIINLS NSTQYSVDLS LTHSEKDCSC 420 NKPRTKKLAG AGVNAERMEY HLTAPNGDLQ SPVMLLNGKP LVAGADGSIP ELTPVTRTSS 480 SPVLVDPYSI VFAVIPEAGV QSCTQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03662 | Glyco_hydro_79n | 7.0e-155 | 1 | 318 | 320 | + Glycosyl hydrolase family 79, N-terminal domain. Family of endo-beta-N-glucuronidase, or heparanase. Heparan sulfate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulfate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular micro-environment. Heparanase degrades HS at specific intra-chain sites. The enzyme is synthesised as a latent approximately 65 kDa protein that is processed at the N-terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumour cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY87898.1 | 0 | 12 | 503 | 45 | 540 | hypothetical protein OsI_09318 [Oryza sativa Indica Group] |
GenBank | EAY99897.1 | 0 | 5 | 504 | 28 | 525 | hypothetical protein OsI_21892 [Oryza sativa Indica Group] |
GenBank | EAZ36024.1 | 0 | 5 | 504 | 28 | 525 | hypothetical protein OsJ_20330 [Oryza sativa Japonica Group] |
RefSeq | NP_001048420.1 | 0 | 12 | 503 | 45 | 540 | Os02g0802200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001056967.1 | 0 | 5 | 504 | 28 | 526 | Os06g0179000 [Oryza sativa (japonica cultivar-group)] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE485557 | 235 | 1 | 235 | 0 |
FE485556 | 221 | 286 | 506 | 0 |
FE467305 | 222 | 285 | 506 | 0 |
EX353120 | 287 | 124 | 407 | 0 |
CK266509 | 292 | 75 | 364 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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