Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 106537 |
Family | GT47 |
Protein Properties | Length: 343 Molecular Weight: 40090.3 Isoelectric Point: 9.9181 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 3 | 286 | 0 |
KRFKIFIYPDGDPNTYYQTPRKITGKYASEGYFFQNLRESKFVTKNPNKAHLFFIPISCHKMRGKVPYYLTSNWNKMQGISYEKMADIVQEYVEGLIVKY PYWNRTLGADHFFVTCHDVGARATNKVANLVKNSIRVVCSPSYNGDFIPHKDIAMPQVLQPFALPRGGNDVRNRTILGFWAGHRNSKIRVVLAKLWEEDD VLAISNNRISRATGELVYQKQFYRSKFCICPGGSQVNSARIVDSIHYGCVPVILSDHYDLPFNDVLDWKRFALLLRERDVGDLK |
Full Sequence |
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Protein Sequence Length: 343 Download |
MLKRFKIFIY PDGDPNTYYQ TPRKITGKYA SEGYFFQNLR ESKFVTKNPN KAHLFFIPIS 60 CHKMRGKVPY YLTSNWNKMQ GISYEKMADI VQEYVEGLIV KYPYWNRTLG ADHFFVTCHD 120 VGARATNKVA NLVKNSIRVV CSPSYNGDFI PHKDIAMPQV LQPFALPRGG NDVRNRTILG 180 FWAGHRNSKI RVVLAKLWEE DDVLAISNNR ISRATGELVY QKQFYRSKFC ICPGGSQVNS 240 ARIVDSIHYG CVPVILSDHY DLPFNDVLDW KRFALLLRER DVGDLKLFFF SFFLFSSRVL 300 IASLFRQVQD RFEWHTPPRP YDAFHMVVYE LWLRHFTVQY KK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00613 | GDC-P | 0.007 | 50 | 170 | 138 | + Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <=> S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life. | ||
pfam03016 | Exostosin | 6.0e-53 | 1 | 286 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY84785.1 | 0 | 1 | 340 | 1 | 332 | hypothetical protein OsI_06153 [Oryza sativa Indica Group] |
GenBank | EAZ22017.1 | 0 | 1 | 340 | 77 | 408 | hypothetical protein OsJ_05674 [Oryza sativa Japonica Group] |
RefSeq | NP_001046127.1 | 0 | 1 | 340 | 77 | 402 | Os02g0187200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001132213.1 | 0 | 1 | 340 | 78 | 403 | hypothetical protein LOC100193644 [Zea mays] |
RefSeq | XP_002453426.1 | 0 | 1 | 340 | 78 | 403 | hypothetical protein SORBIDRAFT_04g005890 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO268625 | 282 | 1 | 282 | 0 |
GT802014 | 273 | 5 | 277 | 0 |
EX317869 | 292 | 26 | 317 | 0 |
DV693456 | 274 | 1 | 274 | 0 |
EH770778 | 270 | 17 | 286 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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