y
Basic Information | |
---|---|
Species | Selaginella moellendorffii |
Cazyme ID | 108291 |
Family | AA3 |
Protein Properties | Length: 540 Molecular Weight: 58255.9 Isoelectric Point: 8.657 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA3 | 40 | 511 | 0 |
APEGYDYIIVGGGACGCALAATLSQKFKVLLLERGDSPYGYPVLMREENFAVSMLDLAHSQAFLTTDLVLNARARVLGGGTSINGGFMTRAPKSEIDSIV GLDDYAQVNASYEWLENGISSLPRTGPFQTAYKNALLQAGVTPDNGVTYDHLPGAKVGGTLFDGNGTRRPASNLLPLYANLTNVQVVINALVQKIIFSGS GTPKAVGVQVTGRLSGKTYTVLLRNSSKSEVILTAGAIGTPQLLMLSGIGPRDHLQAKKIKVVADSPDVGKHIVDNPSTRVYIGSPSPVEVSLIQSVGID PSGTYFEGLSSPQKSPIVVVTQKVAKPRSSGEIRLLTLNADDNPQVTFNYFKDSVDMQTCVSGANTLEEVLLTSSFSPFITAFQPMPSGGIVAAPNRRNP LLKPTINITLALYCRTALATMWHYHGSCRVGKVVDRTYRVIGVEKLRVLDSSVFDFSPGTNPQSTFMMLARY |
Full Sequence |
---|
Protein Sequence Length: 540 Download |
MRDHFSPSRC FIVVLTLLSV PATLALNFSF FEEAADARFA PEGYDYIIVG GGACGCALAA 60 TLSQKFKVLL LERGDSPYGY PVLMREENFA VSMLDLAHSQ AFLTTDLVLN ARARVLGGGT 120 SINGGFMTRA PKSEIDSIVG LDDYAQVNAS YEWLENGISS LPRTGPFQTA YKNALLQAGV 180 TPDNGVTYDH LPGAKVGGTL FDGNGTRRPA SNLLPLYANL TNVQVVINAL VQKIIFSGSG 240 TPKAVGVQVT GRLSGKTYTV LLRNSSKSEV ILTAGAIGTP QLLMLSGIGP RDHLQAKKIK 300 VVADSPDVGK HIVDNPSTRV YIGSPSPVEV SLIQSVGIDP SGTYFEGLSS PQKSPIVVVT 360 QKVAKPRSSG EIRLLTLNAD DNPQVTFNYF KDSVDMQTCV SGANTLEEVL LTSSFSPFIT 420 AFQPMPSGGI VAAPNRRNPL LKPTINITLA LYCRTALATM WHYHGSCRVG KVVDRTYRVI 480 GVEKLRVLDS SVFDFSPGTN PQSTFMMLAR YSIISHFRYS CFELNHLCRY MGLEMVKQA* 540 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 2.0e-25 | 44 | 314 | 323 | + choline dehydrogenase; Validated | ||
TIGR01810 | betA | 1.0e-28 | 45 | 509 | 554 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
TIGR03970 | Rv0697 | 6.0e-33 | 111 | 509 | 439 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
COG2303 | BetA | 9.0e-41 | 44 | 510 | 548 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 2.0e-148 | 2 | 511 | 566 | + Protein HOTHEAD |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 27 | 511 | 8 | 508 | H Chain H, Crystal Structure Of Respiratory Complex I From Thermus Thermophilus |
PDB | 3gdp_A | 0 | 27 | 511 | 8 | 508 | H Chain H, Crystal Structure Of Respiratory Complex I From Thermus Thermophilus |
PDB | 3gdn_B | 0 | 27 | 511 | 8 | 508 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 27 | 511 | 8 | 508 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 27 | 511 | 8 | 508 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |