| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 115361 |
| Family | PL1 |
| Protein Properties | Length: 325 Molecular Weight: 35262.9 Isoelectric Point: 6.2237 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| PL1 | 56 | 228 | 0 |
| GNMTIFLQEMLWIRSMTTIDGRGFNVTITGRNLVLGGVSNVILHNLQISSVGESDTIHIYAGSKKIWVDHVSSWDARLGLVSVLQGSTDVTISNSLLTNP NFNMLLGASDADTEDKIMKVTVYRNWFKDSTQRMPHCRWGYCHVVNNLYTNWGYYAIGGRVNAKILSDNNVFV | |||
| Full Sequence |
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| Protein Sequence Length: 325 Download |
| CALGFAAGVV GGANGLAYVV TNPQDDDPKI PVPGTLRYGV SLGNSDGNGV WITFAGNMTI 60 FLQEMLWIRS MTTIDGRGFN VTITGRNLVL GGVSNVILHN LQISSVGESD TIHIYAGSKK 120 IWVDHVSSWD ARLGLVSVLQ GSTDVTISNS LLTNPNFNML LGASDADTED KIMKVTVYRN 180 WFKDSTQRMP HCRWGYCHVV NNLYTNWGYY AIGGRVNAKI LSDNNVFVAG RRSEVTPWFS 240 LHGPEFDTTA TITSSNDLFL NGSTFHQFMG VEPMSLTEVP PAYPTPDHNP PIHSTSTLPQ 300 FLEQCAGAIF GDSLARCMFA SSKV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3866 | PelB | 3.0e-28 | 65 | 227 | 178 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
| pfam00544 | Pec_lyase_C | 8.0e-42 | 70 | 227 | 180 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
| smart00656 | Amb_all | 5.0e-52 | 68 | 231 | 178 | + Amb_all domain. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI39737.1 | 0 | 1 | 286 | 5 | 310 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_001753505.1 | 0 | 1 | 317 | 8 | 324 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761530.1 | 0 | 1 | 317 | 15 | 330 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001763554.1 | 0 | 1 | 265 | 47 | 330 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002522747.1 | 0 | 1 | 265 | 71 | 356 | Pectate lyase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1pxz_B | 0 | 1 | 289 | 24 | 333 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1pxz_A | 0 | 1 | 289 | 24 | 333 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
| PDB | 1vbl_A | 0.00000000000002 | 65 | 227 | 127 | 330 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1pe9_B | 0.000000000001 | 63 | 281 | 80 | 343 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1pe9_A | 0.000000000001 | 63 | 281 | 80 | 343 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DC950609 | 216 | 102 | 317 | 0 |
| BJ867600 | 225 | 92 | 315 | 0 |
| BJ867266 | 218 | 90 | 306 | 0 |
| JG594056 | 167 | 26 | 192 | 0 |
| HO592271 | 186 | 130 | 310 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Physcomitrella patens | Pp1s9_110V6.1 | ||||
| Picea abies | MA_20455g0010 | ||||
| Selaginella moellendorffii | 92002 | 13606 | 13694 | ||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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