Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 126225 |
Family | GT47 |
Protein Properties | Length: 420 Molecular Weight: 47678.3 Isoelectric Point: 6.8867 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 21 | 360 | 0 |
SCSGKWIYSYNLPARFNADLVALCDRILPWYSMCDYFENSGMGKAVTTDRAGVLKPAGRWHKTNQYMLEVLFHARLKEYACLTDDPAKAQLFYIPYYGGL DVFRYHYANVSYEQKDELGVELMGLLEQHESWRRNGGIDHFLVLGKITWDFRRTDTEWGNTLLMLPGLENVTRLLLERDPWNANDVGVPHPTYFHPASDR DVEEWLHAVASSRRDALFSFAGMPRTTDSIRAVLIAICTSQPRLCRFLECSGDVCLRPESTTELFLASHFCLQPVGDSATRRSVFDSLIAGCIPVLFSQE TAYVQYPWHLPARLADYSVYVPAEDVKSGTVDIARLLAAI |
Full Sequence |
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Protein Sequence Length: 420 Download |
MDELREHSRN EDNAVEEPSS SCSGKWIYSY NLPARFNADL VALCDRILPW YSMCDYFENS 60 GMGKAVTTDR AGVLKPAGRW HKTNQYMLEV LFHARLKEYA CLTDDPAKAQ LFYIPYYGGL 120 DVFRYHYANV SYEQKDELGV ELMGLLEQHE SWRRNGGIDH FLVLGKITWD FRRTDTEWGN 180 TLLMLPGLEN VTRLLLERDP WNANDVGVPH PTYFHPASDR DVEEWLHAVA SSRRDALFSF 240 AGMPRTTDSI RAVLIAICTS QPRLCRFLEC SGDVCLRPES TTELFLASHF CLQPVGDSAT 300 RRSVFDSLIA GCIPVLFSQE TAYVQYPWHL PARLADYSVY VPAEDVKSGT VDIARLLAAI 360 SPSRRRRMRR TIVTRIIPRL LYAAPAANLT TFRRDAFQVS ITSLLEKSRS ALAALESKL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-54 | 21 | 359 | 356 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001756054.1 | 0 | 21 | 407 | 1 | 394 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001757088.1 | 0 | 17 | 408 | 21 | 419 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001759310.1 | 0 | 21 | 405 | 1 | 392 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001778302.1 | 0 | 1 | 405 | 7 | 410 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002509789.1 | 0 | 20 | 407 | 180 | 562 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC346433 | 252 | 112 | 357 | 0 |
FC451292 | 241 | 111 | 345 | 0 |
FC340904 | 244 | 21 | 258 | 0 |
BJ964869 | 226 | 27 | 245 | 0 |
JG636298 | 267 | 95 | 353 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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