| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 132959 |
| Family | AA3 |
| Protein Properties | Length: 518 Molecular Weight: 55684.2 Isoelectric Point: 9.7322 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 1 | 474 | 0 |
| YDYIIVGGGTTGSPLAATLSTKYKVLVLERGASPYGNPNISRIENFGAILADVGPQSPLQVFFSSEGVRNRRARVLGGGSSVNAGIYSHAEQSFISALGL NPCLVDQSYRWVESVVASIPNQLGPYQRAFRASLLQAGITPDNNATYDHLVGTKTFGSIFDQSGSRRPASNLFVYANPSNIKVLLHATVLRVLFSQARSG LSPRTYGVEFKDELGRIRKAFLSHPGKESSEVILCAGAIASPQLLMLSGIGPGNHLRSKGIKVIKDFPEVGKHMADNPAISLVVPSPSYVEVSTSLSVGI TSFGSYIEAGSGGVRGPNATFVSEKVNGPASTGELYLATTNVDDDPVVSFNYFQEPRDLQVCIGGVDAIEKALLSNAYKPFRYDNQSLPSGGTVSFPSRR NSSALAINNTLADYCKRKVVTLYHFHGGCLVNKVVDSSFKVIGIRNLRVLDGSVFHVSPGTNPQATLMMLGRYA | |||
| Full Sequence |
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| Protein Sequence Length: 518 Download |
| YDYIIVGGGT TGSPLAATLS TKYKVLVLER GASPYGNPNI SRIENFGAIL ADVGPQSPLQ 60 VFFSSEGVRN RRARVLGGGS SVNAGIYSHA EQSFISALGL NPCLVDQSYR WVESVVASIP 120 NQLGPYQRAF RASLLQAGIT PDNNATYDHL VGTKTFGSIF DQSGSRRPAS NLFVYANPSN 180 IKVLLHATVL RVLFSQARSG LSPRTYGVEF KDELGRIRKA FLSHPGKESS EVILCAGAIA 240 SPQLLMLSGI GPGNHLRSKG IKVIKDFPEV GKHMADNPAI SLVVPSPSYV EVSTSLSVGI 300 TSFGSYIEAG SGGVRGPNAT FVSEKVNGPA STGELYLATT NVDDDPVVSF NYFQEPRDLQ 360 VCIGGVDAIE KALLSNAYKP FRYDNQSLPS GGTVSFPSRR NSSALAINNT LADYCKRKVV 420 TLYHFHGGCL VNKVVDSSFK VIGIRNLRVL DGSVFHVSPG TNPQATLMML GRYAIIFSLP 480 STEIFDRVST TQICWKSHNR SRSKRVKVSS HHATIQE* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 4.0e-29 | 1 | 276 | 326 | + choline dehydrogenase; Validated | ||
| TIGR01810 | betA | 4.0e-32 | 2 | 471 | 551 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
| TIGR03970 | Rv0697 | 2.0e-32 | 2 | 477 | 532 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| COG2303 | BetA | 6.0e-39 | 1 | 472 | 553 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| PLN02785 | PLN02785 | 4.0e-175 | 1 | 473 | 521 | + Protein HOTHEAD | ||
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3red_L | 0 | 1 | 473 | 27 | 509 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_K | 0 | 1 | 473 | 27 | 509 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_J | 0 | 1 | 473 | 27 | 509 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_I | 0 | 1 | 473 | 27 | 509 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| PDB | 3red_H | 0 | 1 | 473 | 27 | 509 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
| suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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