| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 153538 |
| Family | AA3 |
| Protein Properties | Length: 438 Molecular Weight: 46972.5 Isoelectric Point: 6.8826 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 25 | 436 | 0 |
| VPNARARILGGGSSINGGFMTRAPKSEIDRIVGLDDYAQVNASYEWLENGIASLPRTGPFQTAYKNALLQAGVTPDNGETYDHLPGTKVGGTLFDENGTR RPASNLLPLYANLTNVQVVINALVQKIIFSGSGTPRAVGVQVMARLSGKTFAILLRNSSKSEVILTAGAIGTPQLLMLSGIGPRDHLQAKNIEVVVDSPE VGKNIVDNPSTRVYILSPSPVEVSLIQSVGIDPSGTYFEALSGTQHSPTVVVTQKVANPRSSGEIQLLTLNADDNPQVTFNYLKDPVDMQTCVSGANTLE EVLLTSSFSHFITGLQPMPSGGTVAAPNRRNPLLKPTINTTLALYCQLSVATMYHYHGSCRVGKVVDPTYRVLGVEKLRVLDGSMFDFSPGTNPQSTFMM LARYMGLEMIKQ | |||
| Full Sequence |
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| Protein Sequence Length: 438 Download |
| MREENSALSI LDQAHSQGFF TTDLVPNARA RILGGGSSIN GGFMTRAPKS EIDRIVGLDD 60 YAQVNASYEW LENGIASLPR TGPFQTAYKN ALLQAGVTPD NGETYDHLPG TKVGGTLFDE 120 NGTRRPASNL LPLYANLTNV QVVINALVQK IIFSGSGTPR AVGVQVMARL SGKTFAILLR 180 NSSKSEVILT AGAIGTPQLL MLSGIGPRDH LQAKNIEVVV DSPEVGKNIV DNPSTRVYIL 240 SPSPVEVSLI QSVGIDPSGT YFEALSGTQH SPTVVVTQKV ANPRSSGEIQ LLTLNADDNP 300 QVTFNYLKDP VDMQTCVSGA NTLEEVLLTS SFSHFITGLQ PMPSGGTVAA PNRRNPLLKP 360 TINTTLALYC QLSVATMYHY HGSCRVGKVV DPTYRVLGVE KLRVLDGSMF DFSPGTNPQS 420 TFMMLARYMG LEMIKQA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 1.0e-24 | 28 | 231 | 233 | + choline dehydrogenase; Validated | ||
| TIGR01810 | betA | 3.0e-27 | 28 | 426 | 470 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
| COG2303 | BetA | 3.0e-34 | 28 | 427 | 471 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| TIGR03970 | Rv0697 | 9.0e-35 | 28 | 426 | 436 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| PLN02785 | PLN02785 | 3.0e-137 | 16 | 436 | 470 | + Protein HOTHEAD | ||
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gdp_B | 0 | 19 | 436 | 89 | 516 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3gdp_A | 0 | 19 | 436 | 89 | 516 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3gdn_B | 0 | 19 | 436 | 89 | 516 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 3gdn_A | 0 | 19 | 436 | 89 | 516 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 1ju2_B | 0 | 19 | 436 | 89 | 516 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
| suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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