Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 231117 |
Family | CBM43 |
Protein Properties | Length: 470 Molecular Weight: 51739.7 Isoelectric Point: 6.6742 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 357 | 438 | 2.9e-26 |
WCVLNPEVDDLSKLPATISYACSYADCSTLAYGGSCNHIGRTGNASYAFNSFYQMNNQRTESCHFGGLGMITETDPSSGNCQ | |||
GH17 | 7 | 329 | 0 |
VGVNWGTVTSHRLPDKMIVKLLQESRISKVKLFDADPSVIRAFAGTDLELMVAVPNDLLEDMAFSEKAARRFVRRNITKFLSHQDGVNIRYIAVGNEPFL KAYNGSYEDVTIPAIRNMQQAIEQAGIQHKVTLVVPLNADILTSSGNSGKPSQGAIRPDIRRLMRTILEFLDKHKAPFVINMYPFLSLQQDSHFPSDFAF FDGTAHVLSDGRNIYSNVFDASYDLLVSALAREGFPDMEIVVGEVGWPTDGDIYANIPNAQRFNQQLIRHVTSNRGTPLRPGIPIEIYIFGLVDEDRKSV LPGNFERHWGLYRYDGKPKYSLD |
Full Sequence |
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Protein Sequence Length: 470 Download |
MTGVDSVGVN WGTVTSHRLP DKMIVKLLQE SRISKVKLFD ADPSVIRAFA GTDLELMVAV 60 PNDLLEDMAF SEKAARRFVR RNITKFLSHQ DGVNIRYIAV GNEPFLKAYN GSYEDVTIPA 120 IRNMQQAIEQ AGIQHKVTLV VPLNADILTS SGNSGKPSQG AIRPDIRRLM RTILEFLDKH 180 KAPFVINMYP FLSLQQDSHF PSDFAFFDGT AHVLSDGRNI YSNVFDASYD LLVSALAREG 240 FPDMEIVVGE VGWPTDGDIY ANIPNAQRFN QQLIRHVTSN RGTPLRPGIP IEIYIFGLVD 300 EDRKSVLPGN FERHWGLYRY DGKPKYSLDV SGRGGNGLSS PINLMSVSGV TYLPSRWCVL 360 NPEVDDLSKL PATISYACSY ADCSTLAYGG SCNHIGRTGN ASYAFNSFYQ MNNQRTESCH 420 FGGLGMITET DPSSGNCQFR VEITPWSAAS TVWRGGAALL VVSLLVALS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0004 | 203 | 321 | 124 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-18 | 356 | 426 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-31 | 357 | 439 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-73 | 7 | 329 | 324 | + Glycosyl hydrolases family 17. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08871.1 | 0 | 1 | 443 | 1 | 433 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
RefSeq | XP_002324967.1 | 0 | 7 | 443 | 9 | 439 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002459388.1 | 0 | 6 | 449 | 28 | 465 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
RefSeq | XP_002515573.1 | 0 | 2 | 444 | 25 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002530257.1 | 0 | 7 | 444 | 29 | 456 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 7 | 331 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3f55_C | 0 | 7 | 331 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3f55_B | 0 | 7 | 331 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3f55_A | 0 | 7 | 331 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3em5_D | 0 | 7 | 331 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO797198 | 444 | 7 | 449 | 0 |
EX345626 | 313 | 92 | 404 | 0 |
EX343142 | 316 | 124 | 439 | 0 |
GT048566 | 336 | 105 | 439 | 0 |
EX345865 | 296 | 92 | 387 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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