| Basic Information | |
|---|---|
| Species | Selaginella moellendorffii |
| Cazyme ID | 232555 |
| Family | AA3 |
| Protein Properties | Length: 488 Molecular Weight: 52504.6 Isoelectric Point: 8.991 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 12 | 486 | 0 |
| YDYIVVGGGTAGCPLAATLSQKFRVLLLERGGSPYGNPNVTLRDNFIVNYLNQGSDTPVQGFVSTEGVPNARARVLGGGTSINIGFYNRASPQVISDLGL DGSLANASFRWVEQVVTSVPRLGPYQAAFRRSLIKAGVTPDNGASYDFQVGTQTGGTIFDDQGTRRPASNLLVYANPRNLDILLHAQVELILFSGKVSNT YLWQDDLGIFSWQEIENTDHLAEKSPGRSDSMRRYTRKSTVTFVEWSWASKPAVTAMGIKVVYNLPGVGKQVSDNPAALVNIVSPSPVESALAQVVGITA PFGNFIEAACGVAVTGVPGARAGNIIEKVAGPLSSGTLVLQSKNVRDNPLVTFNYFQDPRDLQTCIAGVNTIEEVILANSFRPFVYDNQTLPSGGTVGAP NRRNPAFAATINTTIANYCRERLTTIWHYHGGCLVNQVVDSDYRVLGIKGLRVVDGSTFKYSPGTIPQATILMLG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 488 Download |
| MREATVVKYK LYDYIVVGGG TAGCPLAATL SQKFRVLLLE RGGSPYGNPN VTLRDNFIVN 60 YLNQGSDTPV QGFVSTEGVP NARARVLGGG TSINIGFYNR ASPQVISDLG LDGSLANASF 120 RWVEQVVTSV PRLGPYQAAF RRSLIKAGVT PDNGASYDFQ VGTQTGGTIF DDQGTRRPAS 180 NLLVYANPRN LDILLHAQVE LILFSGKVSN TYLWQDDLGI FSWQEIENTD HLAEKSPGRS 240 DSMRRYTRKS TVTFVEWSWA SKPAVTAMGI KVVYNLPGVG KQVSDNPAAL VNIVSPSPVE 300 SALAQVVGIT APFGNFIEAA CGVAVTGVPG ARAGNIIEKV AGPLSSGTLV LQSKNVRDNP 360 LVTFNYFQDP RDLQTCIAGV NTIEEVILAN SFRPFVYDNQ TLPSGGTVGA PNRRNPAFAA 420 TINTTIANYC RERLTTIWHY HGGCLVNQVV DSDYRVLGIK GLRVVDGSTF KYSPGTIPQA 480 TILMLGR* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 2.0e-8 | 343 | 484 | 147 | + choline dehydrogenase; Validated | ||
| PRK02106 | PRK02106 | 9.0e-12 | 12 | 285 | 331 | + choline dehydrogenase; Validated | ||
| TIGR01810 | betA | 1.0e-18 | 13 | 486 | 556 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
| pfam05199 | GMC_oxred_C | 1.0e-21 | 343 | 486 | 149 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| PLN02785 | PLN02785 | 1.0e-147 | 12 | 487 | 528 | + Protein HOTHEAD | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31862.1 | 0 | 12 | 487 | 47 | 527 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI34759.1 | 0 | 1 | 487 | 35 | 561 | unnamed protein product [Vitis vinifera] |
| GenBank | EEE57571.1 | 0 | 3 | 487 | 36 | 550 | hypothetical protein OsJ_07923 [Oryza sativa Japonica Group] |
| RefSeq | XP_002282510.1 | 0 | 12 | 487 | 13 | 527 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298074.1 | 0 | 12 | 487 | 46 | 559 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ju2_B | 0 | 12 | 487 | 27 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 1ju2_A | 0 | 12 | 487 | 27 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdp_B | 0 | 12 | 487 | 27 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdp_A | 0 | 12 | 487 | 27 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdn_B | 0 | 12 | 487 | 27 | 507 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
| suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO796743 | 523 | 13 | 487 | 0 |
| CT579560 | 205 | 1 | 204 | 0 |
| GH205836 | 316 | 5 | 320 | 0 |
| EX440051 | 209 | 1 | 208 | 0 |
| EH185636 | 196 | 12 | 207 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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