Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 27847.m000126 |
Family | AA1 |
Protein Properties | Length: 556 Molecular Weight: 61051.3 Isoelectric Point: 9.7237 |
Chromosome | Chromosome/Scaffold: 27847 Start: 42968 End: 46172 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 21 | 542 | 0 |
CRVRRYNFNVVTKTSTKLCSSKPIVTVNGKFPGPTLYAREDDTVLVRVVNKVKYNVSIHWHGVRQLRTGWADGPAYITQCPIQPGQNYVYNFTLTGQRGT LLWHAHILWLRSTVHGAIVILPKRGVPYPFPKPHKEEVVILAEWWKSDTEAVINEAMKSGLAPNVSDAHTINGHPGAVPNCPSQSGFRLPVESGKAYLLR LINAALNEELFFKIAGHQLTVVEIDACYVKPLKTDTVLLAPGQTTNVLVTANKNSGKYLVTASPFMDAPVAVDNRTATATLHYSGTLASAPTTVATPPPQ NASAVANNFINSLRSLNSQKYPARVPLKVDHNLLFTVGLGINACPSCKAANGSRVVASINNVTFVMPTTALLQAHFFKISGVFTTDFPSKPPHVFNFTGS GPKNLNTVRATKVYRLKYNDTVQLVMQDTGVIAPESHPIHLHGFNFFVVGRGLGNYNPNTDPQNFNLVDPAERNTIGVPTGGWAAIRFRADNPGVWFMHC HLEVHTTWGLKMAFLVDNGKGP |
Full Sequence |
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Protein Sequence Length: 556 Download |
MESLFRFLLL FVCFLPVFVD CRVRRYNFNV VTKTSTKLCS SKPIVTVNGK FPGPTLYARE 60 DDTVLVRVVN KVKYNVSIHW HGVRQLRTGW ADGPAYITQC PIQPGQNYVY NFTLTGQRGT 120 LLWHAHILWL RSTVHGAIVI LPKRGVPYPF PKPHKEEVVI LAEWWKSDTE AVINEAMKSG 180 LAPNVSDAHT INGHPGAVPN CPSQSGFRLP VESGKAYLLR LINAALNEEL FFKIAGHQLT 240 VVEIDACYVK PLKTDTVLLA PGQTTNVLVT ANKNSGKYLV TASPFMDAPV AVDNRTATAT 300 LHYSGTLASA PTTVATPPPQ NASAVANNFI NSLRSLNSQK YPARVPLKVD HNLLFTVGLG 360 INACPSCKAA NGSRVVASIN NVTFVMPTTA LLQAHFFKIS GVFTTDFPSK PPHVFNFTGS 420 GPKNLNTVRA TKVYRLKYND TVQLVMQDTG VIAPESHPIH LHGFNFFVVG RGLGNYNPNT 480 DPQNFNLVDP AERNTIGVPT GGWAAIRFRA DNPGVWFMHC HLEVHTTWGL KMAFLVDNGK 540 GPNESLLPPP SDLPKC |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 1.0e-48 | 24 | 518 | 502 | + oxidoreductase | ||
pfam07732 | Cu-oxidase_3 | 4.0e-50 | 29 | 145 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02604 | PLN02604 | 1.0e-85 | 20 | 534 | 548 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-90 | 23 | 534 | 544 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 21 | 556 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002308208.1 | 0 | 5 | 556 | 7 | 560 | laccase 1c [Populus trichocarpa] |
RefSeq | XP_002308209.1 | 0 | 7 | 556 | 1 | 550 | laccase 1d [Populus trichocarpa] |
RefSeq | XP_002322961.1 | 0 | 3 | 556 | 4 | 557 | laccase 1a [Populus trichocarpa] |
RefSeq | XP_002322962.1 | 0 | 3 | 556 | 4 | 557 | laccase 1b [Populus trichocarpa] |
RefSeq | XP_002533894.1 | 0 | 1 | 556 | 1 | 556 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 22 | 534 | 2 | 521 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
PDB | 1asq_A | 0 | 22 | 534 | 2 | 521 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
PDB | 1asp_B | 0 | 22 | 534 | 2 | 521 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |