Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 27894.m000774 |
Family | CBM57 |
Protein Properties | Length: 897 Molecular Weight: 99121.8 Isoelectric Point: 5.3871 |
Chromosome | Chromosome/Scaffold: 27894 Start: 44233 End: 52368 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 414 | 593 | 1.3e-27 |
INCGGPKLTFENNEYEEDLTRGSPSSFISVSERWAYSSTGAYMNNDGAEFLAGNRFNLSVTDGDVYKSARLSAQSLKYYGLCMREGSYKVRLHFAEIMYS DDQTFSSLGRRIFDVSIQGNVVLENFNIMEKAGGVGKGYIAEFDNIWVNGTTLEIHLYWLGKGTTAIPNRGVYGPLISAI |
Full Sequence |
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Protein Sequence Length: 897 Download |
MGFVRSILRI VSVIAFGFLL LDCFAVVELG SQAQVLPPEE VQVLWTISTK LNNSHWNITE 60 ASCSKPEWNN TIWDTTIQSI VTCNCSFESG TICHVTNFQL KGFNLTGVLP DELGNLTHLV 120 QIDLTRNYLS GTIPTRLAQL PNLRILSFLG NRLNGSIPPE IGNIATLEEL VLEDNLLGGP 180 LPPSLGNLRN LRRLLLSANN FTGTIPDTFG NLNLTDFRID GSALSGKIPE FIGNWTTLDR 240 LDLQGTSMEG PIPATISQLT ILTELRISDL SGSSSNFPNL EATKNMERLI LRNCRITGSI 300 PIYIGEMTVL KQLDLSFNRL TGSIPDSLQS LEAIDYMFLT NNSLTGEIPS WILRTSKNYD 360 LSYNNFTGTV STSCQQPEVN LVSSQLSSAS SETAWCLRKD LTCSGDPEHH SLFINCGGPK 420 LTFENNEYEE DLTRGSPSSF ISVSERWAYS STGAYMNNDG AEFLAGNRFN LSVTDGDVYK 480 SARLSAQSLK YYGLCMREGS YKVRLHFAEI MYSDDQTFSS LGRRIFDVSI QGNVVLENFN 540 IMEKAGGVGK GYIAEFDNIW VNGTTLEIHL YWLGKGTTAI PNRGVYGPLI SAITVTPNFE 600 VDTGGGLSVG AIIGIVAASC VVVISILVAL RLSGYLGGKD LEDNELRGLD LQTGYFTLRQ 660 IKHATNNFDP ANKIGEGGFG PVYKGLLSDG AVIAVKQLSS KSKQGNREFV NEIGMISALQ 720 HPNLVKLYGC CIEGNQLLLV YEYLENNSLA RALFGRDEQR LHLDWSTRKK IMLGIAKGLA 780 YLHEESRLKI VHRDIKATNV LLDKDLNAKI SDFGLAKLDE EENTHISTRI AGTIGYMAPE 840 YAMRGYLTDK ADVYSFGVVV LEIVSGKSNT NYRPKEEFVY LLDWKKRRAD YSNRLFL 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00220 | S_TKc | 2.0e-49 | 668 | 868 | 203 | + Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily. | ||
smart00219 | TyrKc | 7.0e-50 | 673 | 865 | 201 | + Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily. | ||
smart00221 | STYKc | 1.0e-50 | 673 | 865 | 201 | + Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. | ||
cd00180 | PKc | 3.0e-51 | 674 | 863 | 194 | + Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. | ||
pfam11721 | Malectin | 6.0e-52 | 410 | 593 | 186 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0005524 | ATP binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20154.1 | 0 | 7 | 897 | 152 | 1054 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_175749.1 | 0 | 1 | 884 | 1 | 883 | leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283453.1 | 0 | 32 | 884 | 25 | 869 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316847.1 | 0 | 1 | 884 | 1 | 889 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524510.1 | 0 | 1 | 897 | 1 | 897 | kinase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ulz_A | 0 | 652 | 886 | 16 | 253 | A Chain A, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2 (Bgachbp2) |
PDB | 3uim_A | 0 | 652 | 886 | 16 | 253 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
PDB | 3tl8_H | 0 | 652 | 886 | 24 | 261 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_G | 0 | 652 | 886 | 24 | 261 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_D | 0 | 652 | 886 | 24 | 261 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |