y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 27916.m000159 |
Family | GT64 |
Protein Properties | Length: 704 Molecular Weight: 79492.7 Isoelectric Point: 8.9909 |
Chromosome | Chromosome/Scaffold: 27916 Start: 87343 End: 91926 |
Description | glycosyltransferase family protein 47 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT64 | 458 | 694 | 0 |
FTLLTMTYDARLWNLKMYVKHYSSCSSVKEIVVVWNKGIPPKLSDLDSAVPIRIRVENKNSLNNRFKKDSLIKTRAVLELDDDIMMTCDDIERGFNVWRQ YPDRIVGFYPRYISGSPLKYRGEKYARTHKGYNMILTGAAFIDSKLAFERYWGEEAKAGREMVDKNFNCEDVLLNYLYANASSSKTVEYVRPTWAIDTSK FSGAAISRNTQAHYKIRSSCLQKFSEMYGSLAGRKSE |
Full Sequence |
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Protein Sequence Length: 704 Download |
MFNKPLNGGD AAVMGLNSVG CRQDNEGSWS IGVFYGHSPF SLKPIETMNV WKDDSAAWPV 60 ANPVITCASV SDAGFPSNFV ADPFLYIQGD IIYIFYETKN SITMQGDIGV AKSTDKGATW 120 QQLGIALDED WHLSYPYVFD YLGEIYMMPE GSAKGELRLY RAINFPLQWT LEKILIKKPL 180 VDSFVIKHDG EFWLFGSDHS SFGTKKNGQL EIWHSSSPLG PWKPHKKNPI YNVDKSLGAR 240 NGGRPFVYDG NLYRIGQDCG ETYGRRVRVF KVETLTKDNY NEVEVSLGFE EPSKGRNDWN 300 GARYHHLDVQ QLSTGEWIGI MDGDRVPSGD SVRRFILGCA SLAAVIAIIM VLGVLLGAVK 360 CIVPLNWCAY YSGKRSDTLL VWERPNVFSS KVRRFCGRLN RAASSLRAKI RPNTWAGKLA 420 LAVIFLAGVA LMCTSVKNVY GGNGAEEPYP LNGYHSQFTL LTMTYDARLW NLKMYVKHYS 480 SCSSVKEIVV VWNKGIPPKL SDLDSAVPIR IRVENKNSLN NRFKKDSLIK TRAVLELDDD 540 IMMTCDDIER GFNVWRQYPD RIVGFYPRYI SGSPLKYRGE KYARTHKGYN MILTGAAFID 600 SKLAFERYWG EEAKAGREMV DKNFNCEDVL LNYLYANASS SKTVEYVRPT WAIDTSKFSG 660 AAISRNTQAH YKIRSSCLQK FSEMYGSLAG RKSEFDRRKD GWDL 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd08994 | GH43_like_2 | 0.0004 | 183 | 268 | 88 | + Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. | ||
pfam09258 | Glyco_transf_64 | 7.0e-73 | 458 | 702 | 247 | + Glycosyl transferase family 64 domain. Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate. |
Gene Ontology | |
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GO Term | Description |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0031227 | intrinsic to endoplasmic reticulum membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB85556.1 | 0 | 2 | 704 | 60 | 764 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_196070.2 | 0 | 2 | 704 | 61 | 765 | glycosyltransferase family protein 47 [Arabidopsis thaliana] |
RefSeq | XP_002262646.1 | 0 | 12 | 704 | 64 | 756 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315348.1 | 0 | 3 | 704 | 84 | 847 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532924.1 | 0 | 1 | 704 | 1 | 704 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1on8_B | 5e-26 | 458 | 693 | 30 | 275 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
PDB | 1on8_A | 5e-26 | 458 | 693 | 30 | 275 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
PDB | 1on6_B | 5e-26 | 458 | 693 | 30 | 275 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
PDB | 1on6_A | 5e-26 | 458 | 693 | 30 | 275 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
PDB | 1omz_B | 5e-26 | 458 | 693 | 30 | 275 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |