Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 28076.m000428 |
Family | GH35 |
Protein Properties | Length: 842 Molecular Weight: 91548.4 Isoelectric Point: 7.1838 |
Chromosome | Chromosome/Scaffold: 28076 Start: 152815 End: 158667 |
Description | beta-galactosidase 8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 32 | 335 | 0 |
LLIDGKRRVLISGSIHYPRSTPEMWPGLIQKSKDGGLDVIETYVFWNGHEPVRNQYNFEGRYDLVKFVKLVAEAGLYVHIRIGPYVCAEWNYGGFPLWLH FIPGIKFRTDNEPFKAEMQRFTAKIVDMMKQEKLYASQGGPIILSQIENEYGNIDSAFGPAAKTYINWAAGMAISLDTGVPWVMCQQADAPDPVINTCNG FYCDQFTPNSKNKPKMWTENWSGWFQSFGGAVPYRPVEDLAFAVARFYQLSGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPLDEYGLLRQPKWGHLK DVHK |
Full Sequence |
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Protein Sequence Length: 842 Download |
MGRKEILVVF FFSVVLAETS FAANVTYDHR ALLIDGKRRV LISGSIHYPR STPEMWPGLI 60 QKSKDGGLDV IETYVFWNGH EPVRNQYNFE GRYDLVKFVK LVAEAGLYVH IRIGPYVCAE 120 WNYGGFPLWL HFIPGIKFRT DNEPFKAEMQ RFTAKIVDMM KQEKLYASQG GPIILSQIEN 180 EYGNIDSAFG PAAKTYINWA AGMAISLDTG VPWVMCQQAD APDPVINTCN GFYCDQFTPN 240 SKNKPKMWTE NWSGWFQSFG GAVPYRPVED LAFAVARFYQ LSGTFQNYYM YHGGTNFGRT 300 TGGPFISTSY DYDAPLDEYG LLRQPKWGHL KDVHKAIKLC EEALIATDPT TTSLGSNLEA 360 TVYKTGSLCA AFLANIATTD KTVTFNGNSY NLPAWSVSIL PDCKNVALNT AKINSVTIVP 420 SFARQSLVGD VDSSKAIGSG WSWINEPVGI SKNDAFVKSG LLEQINTTAD KSDYLWYSLS 480 TNIKGDEPFL EDGSQTVLHV ESLGHALHAF INGKLAGSGT GKSSNAKVTV DIPITLTPGK 540 NTIDLLSLTV GLQNYGAFYE LTGAGITGPV KLKAQNGNTV DLSSQQWTYQ IGLKGEDSGI 600 SSGSSSEWVS QPTLPKNQPL IWYKTSFDAP AGNDPVAIDF TGMGKGEAWV NGQSIGRYWP 660 TNVSPSSGCA DSCNYRGGYS SNKCLKNCGK PSQTFYHIPR SWIKSSGNIL VLLEEIGGDP 720 TQIAFATRQV GSLCSHVSES HPQPVDMWNT DSEGGKRSGP VLSLQCPHPD KVISSIKFAS 780 FGTPHGSCGS YSHGKCSSTS ALSIVQKACV GSKSCNVGVS INTFGDPCRG VKKSLAVEAS 840 CT |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 2.0e-5 | 47 | 189 | 158 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-22 | 764 | 841 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 9.0e-23 | 25 | 327 | 368 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-169 | 31 | 337 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 6 | 842 | 847 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91083.1 | 0 | 17 | 841 | 14 | 841 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAC44501.1 | 0 | 17 | 841 | 22 | 839 | beta-galactosidase [Fragaria x ananassa] |
EMBL | CBI16297.1 | 0 | 6 | 842 | 7 | 846 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002314274.1 | 0 | 11 | 841 | 16 | 848 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530296.1 | 0 | 1 | 842 | 1 | 842 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 5.60519e-45 | 32 | 333 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.00002 | 492 | 717 | 395 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 4e-37 | 34 | 320 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 4e-37 | 34 | 320 | 12 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |