y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 28152.m000917 |
Family | GH3 |
Protein Properties | Length: 810 Molecular Weight: 88487.2 Isoelectric Point: 6.4181 |
Chromosome | Chromosome/Scaffold: 28152 Start: 261769 End: 264757 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 71 | 324 | 0 |
AGIPRLGIPAYEWWSEALHGVSNVGFGVRFNGTVPGATSFPAMILSAASFNETLWLKMGQVVSTEARTMHSVGLAGLTYWSPNVNVFRDPRWGRGQETPG EDPLVVSRYAVNYVRGLQEVGDEGNSTADKLKVSSCCKHYTAYDLDKWKGVDRFHFDAKVTKQDLEDTYQPPFRSCVEEAHVSSVMCSYNRVNGIPTCAD PDLLKGIIRGEWNLDGYIVSDCDSIEVYYDSINYTATPEDAVALALKAGLNMNC |
Full Sequence |
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Protein Sequence Length: 810 Download |
MRIQHLLTLL LSLLLVIFPI ASQNFACDKN SPQTNDYSFC NTSLSYQDRA KDLISRLTLQ 60 EKVQQVVNHA AGIPRLGIPA YEWWSEALHG VSNVGFGVRF NGTVPGATSF PAMILSAASF 120 NETLWLKMGQ VVSTEARTMH SVGLAGLTYW SPNVNVFRDP RWGRGQETPG EDPLVVSRYA 180 VNYVRGLQEV GDEGNSTADK LKVSSCCKHY TAYDLDKWKG VDRFHFDAKV TKQDLEDTYQ 240 PPFRSCVEEA HVSSVMCSYN RVNGIPTCAD PDLLKGIIRG EWNLDGYIVS DCDSIEVYYD 300 SINYTATPED AVALALKAGL NMNCGEFLGK YTVDAVKLNK VEESVVDQAL IYNFIVLMRL 360 GFFDGDPKSL LFGNLGPSDV CSDGHQKLAL DAARQGIVLL YNKGALPLSK NNTRNLAVIG 420 PNANVTTTMI SNYAGIPCKY TTPLQGLQKY VSTVTYAAGC KSVSCSDDTL IDAATQAAAA 480 ADAVVLLVGL DQSIEREGLD RENLTLPGFQ EKLVVDVVNA TNGTVVLVVM SSSPIDVSFA 540 VNKSKIKGIL WVGYPGQAGG DAVAQVMFGD YNPAGRSPFT WYPQEYAHQV PMTDMNMRAN 600 STANFPGRTY RFYAGNTLYK FGHGLSYSTF SNFIISGPST LLLKTNSDLK PDIILSTHNS 660 TEEHPFINSQ AMDITTLNCT NSLLSLILGV RNNGPVSGDH VVLVFWKPPN SSEVTGAANV 720 QLVGFSRVEV NRGKTQNVTL EIDVCKRLSL VDSEGKRKLV TGQHIFTIGS DTEHQVRHHL 780 DVRLAQNGSF GGGSLSYVRA VTEPFHTARQ 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-49 | 397 | 629 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 1.0e-58 | 40 | 447 | 423 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 3.0e-63 | 108 | 744 | 681 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 3.0e-66 | 67 | 349 | 288 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 0 | 21 | 776 | 763 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 2.00386e-43 | 62 | 772 | 61 | 725 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum (Apo Form) |
PDB | 3u48_A | 2.00386e-43 | 62 | 772 | 61 | 725 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum (Apo Form) |
PDB | 3u4a_B | 5.99756e-43 | 62 | 772 | 61 | 725 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum (Apo Form) |
PDB | 3u4a_A | 5.99756e-43 | 62 | 772 | 61 | 725 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum (Apo Form) |
PDB | 4i3g_B | 3e-36 | 43 | 462 | 47 | 444 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |