| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 28492.m000467 |
| Family | AA3 |
| Protein Properties | Length: 745 Molecular Weight: 82088.1 Isoelectric Point: 7.3796 |
| Chromosome | Chromosome/Scaffold: 28492 Start: 21040 End: 24312 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 228 | 743 | 6.44597e-44 |
| EDPDHNTYKIKCDVVIIGSGCGGGVAAAVLASSGQKVLVLEKGNYFVPEDYSSVEGPSMAELYESGGFLPTLNGKIMILAGSTVGGGSAINWSACIKTPD TVLKEWCVDYRIPLFGSPDYHYAMDVVQKRIGVTDNCSNEGFQNQVLRRGCENLGLKVDSVPRNSSADHYCGSCCYGCRTGDKKGTDSTWLVDAVGSGAV ILTGTRAEKFILEEDHSGRSRKRCIGVIAKTSNTNVTKKLQIEARATISACGSLLTPPLMISSGLANPNIGRNLHLHPVIMAWGYFPEHISDLSGKIYEG GIITSVHKVVSEESKVCAILEAPALGPASYAALSPWVSGQDFKDKMVKYARTANLFALIRDQGSGEVKLEKKIKHRMSRSDNENLRIGLRQALRILVGAG AVEVGTYRSDGQRIECKGVKETDLEEFLDTVTASGGLTSKEEYWNMLFSAHQMSSCRMGATEEEGAVDENGESWEAKNLFVCDGSILPSAVGINPMITIQ STAYCISKRIAESMKK | |||
| Full Sequence |
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| Protein Sequence Length: 745 Download |
| MEPKESCHPL LRGGIKKVNT YNHGFSSAQI QTLSAFCETL IPPLPVNNFS NELPFDKQKA 60 LLSFYKASGS EQPIPDEVAE LMVNRGLKEV VLVVDFLLKV LSFRLGTLLL CGFICLEWNW 120 PFIHKFSEIS LSKREDIVKR WAKQKYFFPL RVLFMAVKIF CSYTFFSRTD DNSENPAWEA 180 IGYHKDTREK LTKSRKERPL EKGIVELANE DDLTLVKSLM QKGIQVTEDP DHNTYKIKCD 240 VVIIGSGCGG GVAAAVLASS GQKVLVLEKG NYFVPEDYSS VEGPSMAELY ESGGFLPTLN 300 GKIMILAGST VGGGSAINWS ACIKTPDTVL KEWCVDYRIP LFGSPDYHYA MDVVQKRIGV 360 TDNCSNEGFQ NQVLRRGCEN LGLKVDSVPR NSSADHYCGS CCYGCRTGDK KGTDSTWLVD 420 AVGSGAVILT GTRAEKFILE EDHSGRSRKR CIGVIAKTSN TNVTKKLQIE ARATISACGS 480 LLTPPLMISS GLANPNIGRN LHLHPVIMAW GYFPEHISDL SGKIYEGGII TSVHKVVSEE 540 SKVCAILEAP ALGPASYAAL SPWVSGQDFK DKMVKYARTA NLFALIRDQG SGEVKLEKKI 600 KHRMSRSDNE NLRIGLRQAL RILVGAGAVE VGTYRSDGQR IECKGVKETD LEEFLDTVTA 660 SGGLTSKEEY WNMLFSAHQM SSCRMGATEE EGAVDENGES WEAKNLFVCD GSILPSAVGI 720 NPMITIQSTA YCISKRIAES MKKYY |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.001 | 676 | 739 | 65 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 3.0e-19 | 605 | 733 | 129 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 2.0e-23 | 263 | 726 | 534 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 1.0e-86 | 286 | 506 | 224 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cnj_A | 0.0001 | 675 | 737 | 437 | 494 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 2gew_A | 0.0002 | 675 | 737 | 439 | 496 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4w_A | 0.0002 | 675 | 737 | 439 | 496 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4v_A | 0.0002 | 675 | 737 | 439 | 496 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4u_A | 0.0002 | 675 | 737 | 439 | 496 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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