Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 28543.m000386 |
Family | GT47 |
Protein Properties | Length: 363 Molecular Weight: 42363 Isoelectric Point: 8.5525 |
Chromosome | Chromosome/Scaffold: 28543 Start: 26283 End: 27701 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 2 | 316 | 0 |
KRLKIWVYMEGERPMVHSGPMKNIYAIEGQFIDEMESGESPFIARHADEAHVFFLPVSVAHIVEYIYLPITSYDRDKLIRVFKDYVKVVADKYPFWNRSS GSDHFMLSCHDWAMVHINSIPVELVRAFALGRNLKFEISFHSHRAPEISQHDPELYKNLIRVICNANTSEGFLPTRDVTLPELNIPPGGFDHVHHCLPSH KRRILAFFAGGAHGYIRKILLHHWKNKDDEVQVHEYLSKDEDYRKLMGQSKFCLCPSGYEVASPRIVESIYAGCIPVIISDHYNLPFSDVLDWSQISVQI PVEKIPEIKTILKGV |
Full Sequence |
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Protein Sequence Length: 363 Download |
MKRLKIWVYM EGERPMVHSG PMKNIYAIEG QFIDEMESGE SPFIARHADE AHVFFLPVSV 60 AHIVEYIYLP ITSYDRDKLI RVFKDYVKVV ADKYPFWNRS SGSDHFMLSC HDWAMVHINS 120 IPVELVRAFA LGRNLKFEIS FHSHRAPEIS QHDPELYKNL IRVICNANTS EGFLPTRDVT 180 LPELNIPPGG FDHVHHCLPS HKRRILAFFA GGAHGYIRKI LLHHWKNKDD EVQVHEYLSK 240 DEDYRKLMGQ SKFCLCPSGY EVASPRIVES IYAGCIPVII SDHYNLPFSD VLDWSQISVQ 300 IPVEKIPEIK TILKGVSNDK YLRMQKRVRR VQRHFEINRP SKPFDVLHMV LHSVWLRRLD 360 IRL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00534 | Glycos_transf_1 | 0.002 | 198 | 287 | 90 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
pfam03016 | Exostosin | 1.0e-57 | 1 | 316 | 334 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25537.1 | 0 | 1 | 363 | 140 | 475 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263848.1 | 0 | 1 | 363 | 59 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324625.1 | 0 | 2 | 363 | 3 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331028.1 | 0 | 1 | 363 | 2 | 332 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531944.1 | 0 | 1 | 363 | 1 | 363 | catalytic, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EC939466 | 269 | 1 | 264 | 0 |
GE475605 | 329 | 38 | 363 | 0 |
FD507587 | 260 | 43 | 302 | 0 |
GO373511 | 290 | 74 | 363 | 0 |
CO983212 | 263 | 102 | 363 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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