Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 28623.m000389 |
Family | CE8 |
Protein Properties | Length: 367 Molecular Weight: 40529.3 Isoelectric Point: 9.0905 |
Chromosome | Chromosome/Scaffold: 28623 Start: 9174 End: 10632 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 72 | 360 | 0 |
KKSKSGDFVTLKKALNSIPVINNCRVIISIGAGTYREKIEIPGSMSYITLEGAGAGKTTIEWDDTADKQGQGGHLLGTYGSATFAINSPYFIAKNITFKN KAPSPPSGALGKQAVALRISADTAAFIGCKFIGAQDTLYDHIGRHYFKECYIEGSVDFIFGNGLSLYDDCHLHAITNSFGALTAQKRESMLEETGFSFVN CKVTGSGALYLGRAWGTFSRVVFAYTYMDKIITPTGWYDWGDKNREMTVFYGQYKCSGPGAQFGGRVSWSRELTEQEAKPFVSIDFIDG |
Full Sequence |
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Protein Sequence Length: 367 Download |
MLLLFKLLCL ILLSGSATSW FTSNGSNSNR FVVNEEAYLQ WLKAKQMGSF KHALFQKAKN 60 KFKPCLTIKV NKKSKSGDFV TLKKALNSIP VINNCRVIIS IGAGTYREKI EIPGSMSYIT 120 LEGAGAGKTT IEWDDTADKQ GQGGHLLGTY GSATFAINSP YFIAKNITFK NKAPSPPSGA 180 LGKQAVALRI SADTAAFIGC KFIGAQDTLY DHIGRHYFKE CYIEGSVDFI FGNGLSLYDD 240 CHLHAITNSF GALTAQKRES MLEETGFSFV NCKVTGSGAL YLGRAWGTFS RVVFAYTYMD 300 KIITPTGWYD WGDKNREMTV FYGQYKCSGP GAQFGGRVSW SRELTEQEAK PFVSIDFIDG 360 QDWLLHS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 3.0e-105 | 78 | 364 | 295 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 2.0e-110 | 62 | 364 | 303 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 4.0e-117 | 74 | 364 | 292 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 1.0e-119 | 67 | 366 | 302 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 0 | 14 | 366 | 353 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 76 | 364 | 16 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 6.00036e-42 | 70 | 364 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 1e-29 | 70 | 366 | 35 | 364 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 1e-18 | 70 | 353 | 8 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 1e-18 | 70 | 353 | 8 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |