| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 28629.m000571 |
| Family | AA3 |
| Protein Properties | Length: 1153 Molecular Weight: 128246 Isoelectric Point: 9.036 |
| Chromosome | Chromosome/Scaffold: 28629 Start: 144934 End: 150327 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 16 | 723 | 1.30321e-43 |
| NDDYDAIVVGSGYGGSVAACRLSMAGIKVCLIEKGRRWNAKDFPTDTLQIMSAVRLENRNLGISFGPKDALFQVYEQNDSVAAVACGLGGGSLVNAGVML PTPVRARRNSKWPKAWEKDWDICEASAVAMLRVQSIPVRFPIAKVMQKIAEGDDKETPASLLKLSVNFDVEGSPSNAMTPQQKSSCVACGNCISGCPYDA KNSTDKNYLLSARGCNVRTKCQVKYVVENTGEILQQDRIGGKRRRWRVLNLFSTAGVFGTTEILFQSQLRGLTLSESLGSGFSCNGNTVAYLAGSAAPLN GYGLDKEQMPKIPFHKRPGPSISSSYTYSMGFTIQTAILPRAYPYLLFKGIMTYGWPTGYWLFHGIIDKLKHVIGLKSAQAIVLNAMGYDESDGHIMLDK ITEKICFNPARDPLLSRKIEVYQKLTKKLGGILFMSRYRSTAVHLLGGCNATLDSVGGVCNHNGQIFNSKTAASVHPGLYVCDASLIPCSVGINPSLTIA TVAEHVSRNLVQDILEYNSKRGVNFDILTADENPVLVNEKNLDNGQNSTVLIKETMRGYVGGMPCTAYLKMKMNAQYQKGSGEYNSPSRGSHPLLRGKVG GYVVIRSIEKDKLHIIDGEVDMCLVDCRTPYTQYMHYHLLLAGSSGSRYILEGKKILNPYLFALYAWKETRTLHVTFKKVAMNSSRDTAVLLKGELQVSF MELLKSFI | |||
| Full Sequence |
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| Protein Sequence Length: 1153 Download |
| METQAYFDGR IGGRENDDYD AIVVGSGYGG SVAACRLSMA GIKVCLIEKG RRWNAKDFPT 60 DTLQIMSAVR LENRNLGISF GPKDALFQVY EQNDSVAAVA CGLGGGSLVN AGVMLPTPVR 120 ARRNSKWPKA WEKDWDICEA SAVAMLRVQS IPVRFPIAKV MQKIAEGDDK ETPASLLKLS 180 VNFDVEGSPS NAMTPQQKSS CVACGNCISG CPYDAKNSTD KNYLLSARGC NVRTKCQVKY 240 VVENTGEILQ QDRIGGKRRR WRVLNLFSTA GVFGTTEILF QSQLRGLTLS ESLGSGFSCN 300 GNTVAYLAGS AAPLNGYGLD KEQMPKIPFH KRPGPSISSS YTYSMGFTIQ TAILPRAYPY 360 LLFKGIMTYG WPTGYWLFHG IIDKLKHVIG LKSAQAIVLN AMGYDESDGH IMLDKITEKI 420 CFNPARDPLL SRKIEVYQKL TKKLGGILFM SRYRSTAVHL LGGCNATLDS VGGVCNHNGQ 480 IFNSKTAASV HPGLYVCDAS LIPCSVGINP SLTIATVAEH VSRNLVQDIL EYNSKRGVNF 540 DILTADENPV LVNEKNLDNG QNSTVLIKET MRGYVGGMPC TAYLKMKMNA QYQKGSGEYN 600 SPSRGSHPLL RGKVGGYVVI RSIEKDKLHI IDGEVDMCLV DCRTPYTQYM HYHLLLAGSS 660 GSRYILEGKK ILNPYLFALY AWKETRTLHV TFKKVAMNSS RDTAVLLKGE LQVSFMELLK 720 SFISLGRNRG GTFIYLLLQT FVRTYILKIP RGSHMDFIRN DSCHKPYPSS TLHKMETEDG 780 QIINCRQWKC IQHPQGLKEE KQLNPVLLLN GYSTESYWLP TEPRDFVRTL LQEGHEIWLL 840 QSRVHPMNPA NSFTIEDIGK YDIPAAFSKI LELHGPSTKI HVVAHCAGGL AAHIALMGGH 900 VSACHIASLS CTNSSMFFKL TTLPRIKMWL PLVPVSMAVL GKNNILPLLE TTKASFRHWL 960 LKQIARWIPR YERCTCKECE MFSGIFGNAY WHENVSPTMH QWLNEHSASM LPMGGFPHLR 1020 KICNSGFIVD SNGNNSYLIH PERMAVSTLY ISGGRSLLVT PETSFLANKY MKLHQPGFRH 1080 ERVVVDGFGH SDLLIGEKSY EKVFPHILSH IKLAELEGNG VTSFEKKKYS KEVLEWSDDP 1140 YRGYEGFGSK GNN |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00732 | GMC_oxred_N | 0.0002 | 102 | 247 | 163 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| pfam05199 | GMC_oxred_C | 1.0e-8 | 449 | 520 | 72 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 1.0e-13 | 18 | 529 | 578 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0051536 | iron-sulfur cluster binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62038.1 | 0 | 11 | 1143 | 12 | 1092 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 350 | 1143 | 534 | 1328 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 637 | 1147 | 1 | 514 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002530344.1 | 0 | 1 | 1153 | 1 | 1153 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002530345.1 | 0 | 1 | 1144 | 1 | 1064 | hypothetical protein RCOM_0293450 [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b8s_A | 0.0000000000007 | 21 | 529 | 8 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 2gew_A | 0.000000000002 | 21 | 529 | 8 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4w_A | 0.000000000002 | 21 | 529 | 8 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4v_A | 0.000000000002 | 21 | 529 | 8 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4u_A | 0.000000000002 | 21 | 529 | 8 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DV113989 | 240 | 813 | 1052 | 0 |
| DV112370 | 237 | 815 | 1051 | 0 |
| CF418642 | 220 | 859 | 1078 | 0 |
| FD506713 | 248 | 805 | 1051 | 0 |
| DT750882 | 256 | 636 | 891 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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