| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 28629.m000572 |
| Family | AA3 |
| Protein Properties | Length: 1092 Molecular Weight: 120896 Isoelectric Point: 8.3583 |
| Chromosome | Chromosome/Scaffold: 28629 Start: 151682 End: 157048 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 16 | 493 | 3.1e-34 |
| GNGYDAIVVGSGYGGSIAACRLSVAGIKVCLLEKGRRWKAKDFPTDTLQIMSTVRLENQNLGISIGQKDALFQVYEQNDSLAVVACGLGGGSLVNAGVML PTPVRAKRNSKWPKEWEKDWNTCEASAAAMLRIQSIPVKFPSARVMGEIVEGDIEQTPENLMKFSVNFDVKESSSNSMKLQQMNSCLACGNCISGCPYDA KTGVFGTTEILFQSQMRGLMLSKTLGSGFSCNGNTVAYLAGSAAPLNGYGLDKKQMLEIPFHERPGPSISSSYTSSLGFTIQVNHNAIVCLVTVFRLSRH HLTAVLPRAYPYLLFKGITTYGWPTGYWFFHGIIDKLKHVIGIKSSQAIVLNAMGYDESDGHIMLDESTNKICFSPPHDPLLPRKVEVYQKLTQKLGGIL FMSRYRSTAVHLLGGCNVSSGSSGGVCNHNGQVFDTKTSASVHSGLYVCDASLIPCSIGVNPSLTIATVAELVSRNLV | |||
| Full Sequence |
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| Protein Sequence Length: 1092 Download |
| MERQAYLEAR TGDTEGNGYD AIVVGSGYGG SIAACRLSVA GIKVCLLEKG RRWKAKDFPT 60 DTLQIMSTVR LENQNLGISI GQKDALFQVY EQNDSLAVVA CGLGGGSLVN AGVMLPTPVR 120 AKRNSKWPKE WEKDWNTCEA SAAAMLRIQS IPVKFPSARV MGEIVEGDIE QTPENLMKFS 180 VNFDVKESSS NSMKLQQMNS CLACGNCISG CPYDAKTGVF GTTEILFQSQ MRGLMLSKTL 240 GSGFSCNGNT VAYLAGSAAP LNGYGLDKKQ MLEIPFHERP GPSISSSYTS SLGFTIQVNH 300 NAIVCLVTVF RLSRHHLTAV LPRAYPYLLF KGITTYGWPT GYWFFHGIID KLKHVIGIKS 360 SQAIVLNAMG YDESDGHIML DESTNKICFS PPHDPLLPRK VEVYQKLTQK LGGILFMSRY 420 RSTAVHLLGG CNVSSGSSGG VCNHNGQVFD TKTSASVHSG LYVCDASLIP CSIGVNPSLT 480 IATVAELVSR NLVHDILDYN SKRGKNFGIL TVDQNSCSVA DNNLDNGHDS TLLIKETLRG 540 YVGGMPCTAY LKMKMNAQYQ EGLDGQNLLS SGSHPLLKGK VGGYILQGKK ILNPYLFALY 600 AWKETTTLHV TLKRVSANTG RDTMMILKGE LQISFKELLK SFKSLKGNSA ARFIYILLQS 660 FVRTYLLQIP RRSHMDFIPN DPCLEPYPSS VLHKIETEDG HIISCRQWKS VQNLSGLKGE 720 KHLSPVLLLN GYSTESYWLP TEPHDLVRTL LQEGHEIWLL QTRLHPMNPA NSFTLEDIGK 780 YDIPAAIVKI LELHGPSSKI HVIAHCVGGL AIHIALMGGH VSAAHIASLS CTNSSMFFKL 840 TPLARFKMWL PLVPVSMVIL GKKSILNLLE TAKTSSRHWL LKCIAYCLPR YERCTCKECE 900 IFSGIFGNTF WHENVSPTIH QWLNEHSSTR LPMGAFPHLR EICNSGFIMD SNGNNSYLIH 960 PERMAVPTLY ISGGRTLLVT PETSFLANKY MRLHQPSSRH ERVVIDEFGH SDLLIGEESY 1020 EKVFPHLLSH IRLAELEGNG IMNFERKKYS KEVLDWSHDP YEGHGGFGSW SSPLAVILFF 1080 LFLLLVLVSS LM |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2303 | BetA | 0.0006 | 372 | 486 | 119 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| COG1233 | COG1233 | 0.0001 | 19 | 52 | 34 | + Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | ||
| COG0644 | FixC | 3.0e-5 | 19 | 52 | 34 | + Dehydrogenases (flavoproteins) [Energy production and conversion] | ||
| pfam05199 | GMC_oxred_C | 7.0e-7 | 416 | 486 | 71 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 6.0e-8 | 19 | 114 | 105 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0051536 | iron-sulfur cluster binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62038.1 | 0 | 12 | 1063 | 13 | 1092 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 319 | 1063 | 536 | 1328 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 576 | 1079 | 19 | 526 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002530344.1 | 0 | 1 | 1069 | 1 | 1149 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002530345.1 | 0 | 1 | 1065 | 1 | 1065 | hypothetical protein RCOM_0293450 [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.00001 | 15 | 120 | 8 | 128 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1coy_A | 0.00001 | 15 | 120 | 8 | 128 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 1hlg_B | 0.0001 | 693 | 847 | 22 | 178 | A Chain A, Crystal Structure Of Human Gastric Lipase |
| Transmembrane Domains | ||||
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| Start | End | |||
| 1069 | 1091 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DV113989 | 240 | 733 | 972 | 0 |
| DV112370 | 237 | 735 | 971 | 0 |
| CF418642 | 218 | 779 | 996 | 0 |
| FD506713 | 248 | 725 | 971 | 0 |
| FD507674 | 245 | 679 | 923 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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