Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 28694.m000675 |
Family | GH35 |
Protein Properties | Length: 845 Molecular Weight: 93848.3 Isoelectric Point: 8.7192 |
Chromosome | Chromosome/Scaffold: 28694 Start: 169005 End: 175636 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 40 | 342 | 0 |
TINGQRRILISGSIHYPRSSPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLKY VPGINFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPIILSQIENEYGPMEYELGAPGQAYSKWAAKMAVGLGTGVPWVMCKQDDAPDPVINTCNGF YCDYFSPNKPYKPKMWTEAWTGWFTEFGGAVPYRPAEDLAFSVARFIQKGGAFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKD LHR |
Full Sequence |
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Protein Sequence Length: 845 Download |
MKKLIMRNID NNNILVVFLL LGLWVCSVSS SVSYDSKAIT INGQRRILIS GSIHYPRSSP 60 EMWPDLIQKA KEGGLDVIQT YVFWNGHEPS PGKYYFEGNY DLVKFIKLVK QAGLYVHLRI 120 GPYVCAEWNF GGFPVWLKYV PGINFRTDNG PFKAQMQRFT TKIVNMMKAE RLFESQGGPI 180 ILSQIENEYG PMEYELGAPG QAYSKWAAKM AVGLGTGVPW VMCKQDDAPD PVINTCNGFY 240 CDYFSPNKPY KPKMWTEAWT GWFTEFGGAV PYRPAEDLAF SVARFIQKGG AFINYYMYHG 300 GTNFGRTAGG PFIATSYDYD APLDEYGLLR QPKWGHLKDL HRAIKLCEPA LVSGAPSVMP 360 LGNYQEAHVF KSKSGACAAF LANYNQRSFA KVSFGNMHYN LPPWSISILP DCKNTVYNTA 420 RIGAQSARMK MSPIPMRGGF SWQAYSEEAS TEGDNTFMMV GLLEQINTTR DVSDYLWYST 480 DVRIDSNEGF LRSGKYPVLT VLSAGHALHV FVNGQLSGTA YGSLESPKLT FSQGVKMRAG 540 INRIYLLSIA VGLPNVGPHF ETWNAGVLGP VTLNGLNEGR RDLSWQKWTY KIGLHGEALS 600 LHSLSGSSSV EWAQGSFVSR KQPLMWYKTT FNAPAGNSPL ALDMGSMGKG QVWINGQSVG 660 RYWPAYKASG NCGVCNYAGT FNEKKCLTNC GEASQRWYHV PRSWLNTAGN LLVVFEEWGG 720 DPNGISLVRR EVDSVCADIY EWQPTLMNYM MQSSGKVNKP LRPKVHLQCG AGQKISLIKF 780 ASFGTPEGVC GSYRQGSCHA FHSYDAFNRL CVGQNWCSVT VAPEMFGGDP CPNVMKKLAV 840 EAVCS |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-7 | 54 | 190 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-21 | 767 | 844 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 3.0e-23 | 34 | 334 | 368 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 3.0e-166 | 38 | 344 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 14 | 845 | 833 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 25 | 845 | 26 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ABV32545.1 | 0 | 24 | 845 | 20 | 841 | beta-galactosidase protein 2 [Prunus persica] |
EMBL | CAC44500.1 | 0 | 27 | 845 | 25 | 843 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | XP_002327432.1 | 0 | 25 | 845 | 19 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 1 | 845 | 1 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1.4013e-45 | 41 | 340 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-40 | 31 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-40 | 31 | 414 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |