| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 28740.m000028 |
| Family | GH3 |
| Protein Properties | Length: 593 Molecular Weight: 62526.9 Isoelectric Point: 5.1138 |
| Chromosome | Chromosome/Scaffold: 28740 Start: 38 End: 1818 |
| Description | beta-xylosidase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 127 | 337 | 0 |
| GVPRLGIPHLWETDAGLGVASQAGPNVRQATALPSGLNTAATWDVDTAYAGGAMIGAEARARGFNVMLAGGVNLMRDPRNGRNFEYGGEDPLLAGRMVGA QIRGIQSNHVVSTLKHFALNDQEIGRTTLNVLISEQAAVTSDLLALQIANEEGNPGAVMCAYNRVNGVYSCENSWLLNDVLKGDWGFTGWVMSDWGAVHS TVPAANAGLDQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 593 Download |
| MAEGGNDFCR RCDFMSCADG FRNCRPGAVR PPSPLFAEDM QVDRLATIRN RIALLCATAV 60 CCGGALAAEP WMNAQLPADE RAALVLREMT QDEKLKLVFG YLGADHEQKK TKRPEPSHNQ 120 SAGFVYGVPR LGIPHLWETD AGLGVASQAG PNVRQATALP SGLNTAATWD VDTAYAGGAM 180 IGAEARARGF NVMLAGGVNL MRDPRNGRNF EYGGEDPLLA GRMVGAQIRG IQSNHVVSTL 240 KHFALNDQEI GRTTLNVLIS EQAAVTSDLL ALQIANEEGN PGAVMCAYNR VNGVYSCENS 300 WLLNDVLKGD WGFTGWVMSD WGAVHSTVPA ANAGLDQQSG MPFDLADYFG APLKEAVTNG 360 WVPQARLDDM ARRVLRTMFE HGVVDHPVAP APESIDFRKH AAVSMKDAQE GMVLLKNAAQ 420 ALPLQRTAKR IAVIGGHADK GVLAGGGSSL VYPVGGNAVP GIAPTTWPGP VMYYPSAPLE 480 AIRRRAPGAT VTYADGADRA AAAALARDSD AVVVFATQWT GEGVDAPDLA LPGGQDDLIA 540 AVAAANPKTV VVLETGGPVT MPWLPNVAAV LEAWYPGTSG GDAIAGILFG EVN 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 5.0e-46 | 61 | 593 | 588 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 8.0e-47 | 412 | 593 | 196 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 1.0e-58 | 57 | 593 | 608 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 1.0e-76 | 119 | 469 | 362 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-95 | 90 | 377 | 306 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA03152.1 | 0 | 67 | 593 | 40 | 562 | beta-D-glucosidase [Cellvibrio gilvus ATCC 13127] |
| RefSeq | NP_419784.1 | 0 | 69 | 593 | 40 | 568 | beta-D-glucosidase [Caulobacter crescentus CB15] |
| RefSeq | XP_002535704.1 | 0 | 1 | 593 | 1 | 593 | Thermostable beta-glucosidase B, putative [Ricinus communis] |
| RefSeq | ZP_04769421.1 | 0 | 70 | 593 | 40 | 571 | Beta-glucosidase [Asticcacaulis excentricus CB 48] |
| RefSeq | ZP_06122542.1 | 0 | 67 | 593 | 37 | 568 | Beta-glucosidase [Caulobacter segnis ATCC 21756] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4i3g_B | 0 | 81 | 498 | 53 | 443 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4i3g_B | 2e-21 | 506 | 593 | 563 | 650 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4i3g_A | 0 | 81 | 498 | 53 | 443 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4i3g_A | 2e-21 | 506 | 593 | 563 | 650 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4iih_B | 0 | 70 | 593 | 13 | 572 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GE178898 | 227 | 115 | 336 | 7e-38 |
| GE172048 | 210 | 128 | 336 | 9e-37 |
| CT924349 | 224 | 120 | 338 | 5e-36 |
| GE171393 | 207 | 131 | 336 | 1e-35 |
| GR711625 | 271 | 57 | 326 | 4e-35 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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