Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 28859.m000330 |
Family | CE8 |
Protein Properties | Length: 368 Molecular Weight: 40269.2 Isoelectric Point: 8.1805 |
Chromosome | Chromosome/Scaffold: 28859 Start: 159043 End: 160639 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 73 | 357 | 0 |
IKVRTDGSGDFKTVTDALKSIPVKNTQRVIVDIGPGVYTEKITVDIQKPFVTLYGSPNAMPTLAFGGTAKEYGTDDSATLIVMSDYFVAANIIIKNTAPR PNGKPQGQAVALRLWGSKAAIYNCRILGFQDTLCDDHGMHFFKDCYIEGTIDFIFGLGKSIYLNSIIHVVDDKLLTVITAQAGSDPKEDTGFVFVHCSIT GDGTGAFLGRAWMPMPRVVFAYTRMGKVIHPGGWFNNFHPERERTVSFAEYKSTGPGYKPNERVKYSKQLTDTEAKKYISLGYIE |
Full Sequence |
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Protein Sequence Length: 368 Download |
MVRGMTSLDA IKCAIILVLA VLISTATSDD TEQIPESQSA LNSWFEANVK PYASRKGTLN 60 PALEAAEANP KTIKVRTDGS GDFKTVTDAL KSIPVKNTQR VIVDIGPGVY TEKITVDIQK 120 PFVTLYGSPN AMPTLAFGGT AKEYGTDDSA TLIVMSDYFV AANIIIKNTA PRPNGKPQGQ 180 AVALRLWGSK AAIYNCRILG FQDTLCDDHG MHFFKDCYIE GTIDFIFGLG KSIYLNSIIH 240 VVDDKLLTVI TAQAGSDPKE DTGFVFVHCS ITGDGTGAFL GRAWMPMPRV VFAYTRMGKV 300 IHPGGWFNNF HPERERTVSF AEYKSTGPGY KPNERVKYSK QLTDTEAKKY ISLGYIEGST 360 WLLPPPKL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 2.0e-76 | 71 | 362 | 301 | + pectinesterase | ||
PLN02432 | PLN02432 | 5.0e-81 | 73 | 362 | 290 | + putative pectinesterase | ||
PLN02773 | PLN02773 | 1.0e-81 | 71 | 363 | 309 | + pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-103 | 14 | 364 | 364 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 4 | 368 | 366 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002321778.1 | 0 | 5 | 366 | 1 | 361 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511043.1 | 0 | 1 | 366 | 1 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002511044.1 | 0 | 29 | 366 | 28 | 365 | Pectinesterase-3 precursor, putative [Ricinus communis] |
RefSeq | XP_002511045.1 | 0 | 1 | 366 | 1 | 365 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002530224.1 | 0 | 1 | 368 | 1 | 368 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 7e-39 | 64 | 362 | 1 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 5e-32 | 75 | 362 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 1e-17 | 65 | 350 | 1 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-17 | 65 | 350 | 1 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-17 | 65 | 350 | 1 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |