CAZyme Information

Basic Information
SpeciesRicinus communis
Cazyme ID29104.m000024
FamilyGH13
Protein PropertiesLength: 556 Molecular Weight: 61061.1 Isoelectric Point: 5.9225
ChromosomeChromosome/Scaffold: 29104 Start: 10 End: 1677
Description
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH13844861.5e-35
  GYCAYVQNFGGTLNGVAERIPYLQEMGVSYLHLLPFLRARQGENDGGFAVSDFDDVEPSLGSNADLVALTTRLREAGISLCSDFILNHVADDHAWALAAK
  AGDEQARAMFLFYPDREMPDRYERTLGQVFPQVAPGNFTPAMGGWVWSTFYPYQWDLNYANPAVFAAMAATLLRLANRGIEVFRLDSTAFLWKREGTNSM
  NQQEAHQILQALRAIVDIVAPGVLLKAEAIVPTRELPAYLGSAEARECHIAYHSSLMAAGWLALSEQGTGVLREVIGNTPALPPSATWLSYVRCHDDIGW
  NVLRAEASADGSDANARLARASRFFAGGEGSYAAGAAFQSTDPNAAHGSNGAAASLVGLERADSGAARALAMRRLQLLHGLALSFGALPVLYMGDELAME
  NDY
Full Sequence
Protein Sequence     Length: 556     Download
SDRMLAVLPD ALRAQAVRRL AIHEPVLRKL LAGLYGQQAD FDAWMGKLME SLGALYAARP    60
AALRELDAQR EAQPEWFLSQ RMLGYCAYVQ NFGGTLNGVA ERIPYLQEMG VSYLHLLPFL    120
RARQGENDGG FAVSDFDDVE PSLGSNADLV ALTTRLREAG ISLCSDFILN HVADDHAWAL    180
AAKAGDEQAR AMFLFYPDRE MPDRYERTLG QVFPQVAPGN FTPAMGGWVW STFYPYQWDL    240
NYANPAVFAA MAATLLRLAN RGIEVFRLDS TAFLWKREGT NSMNQQEAHQ ILQALRAIVD    300
IVAPGVLLKA EAIVPTRELP AYLGSAEARE CHIAYHSSLM AAGWLALSEQ GTGVLREVIG    360
NTPALPPSAT WLSYVRCHDD IGWNVLRAEA SADGSDANAR LARASRFFAG GEGSYAAGAA    420
FQSTDPNAAH GSNGAAASLV GLERADSGAA RALAMRRLQL LHGLALSFGA LPVLYMGDEL    480
AMENDYSYRH RPQHAMDSRW LQRPMFDHTR WSARDDTASN AGQMYQSLIR MVRVRRQQDA    540
LAANAPRTLL DDAPDG 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd11356AmyAc_Sucrose_phosphorylase-like_17.0e-546255192+
cd11356AmyAc_Sucrose_phosphorylase-like_11.0e-43111382276+
TIGR02456treS_nterm2.0e-4594381290+
cd11334AmyAc_TreS2.0e-4885381315+
cd11324AmyAc_Amylosucrase013541535+
Gene Ontology
GO TermDescription
GO:0003824catalytic activity
GO:0005975carbohydrate metabolic process
GO:0043169cation binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002535566.1015561556alpha-amylase, putative [Ricinus communis]
RefSeqYP_003375236.101253225550probable sucrose hydrolase protein [Xanthomonas albilineans]
RefSeqYP_450025.101954430560amylosucrase or alpha amylase [Xanthomonas oryzae pv. oryzae MAFF 311018]
RefSeqZP_06484144.101454425560amylosucrase or alpha amylase [Xanthomonas campestris pv. vasculorum NCPPB702]
RefSeqZP_06488861.101454425560amylosucrase or alpha amylase [Xanthomonas campestris pv. musacearum NCPPB4381]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2wpg_A01954431561A Chain A, Sucrose Hydrolase
PDB3czg_A01754428560A Chain A, Sucrose Hydrolase
PDB3cze_A01754428560A Chain A, Crystal Structure Analysis Of Sucrose Hydrolase (Suh)- Tris Complex
PDB3czl_A01754428560A Chain A, Crystal Structure Analysis Of Sucrose Hydrolase (Suh)- Tris Complex
PDB3czk_A01754428560A Chain A, Crystal Structure Analysis Of Sucrose Hydrolase(Suh) E322q- Sucrose Complex
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EX9193372621273882e-24
FG5998001492333811e-23
BE2492251532353872e-21
CX9430881542293820.00000000000002
JG858766200612510.0000000009
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_014_00091.4Aquca_014_00091.1Aquca_014_00091.3Aquca_014_00091.2Aquca_014_00091.5
Aquca_014_00091.6Aquca_014_00091.7Aquca_018_00158.1Aquca_018_00158.2Aquca_014_00091.8
Aquca_026_00010.1
Arabidopsis lyrata911044483030470308
Arabidopsis thalianaAT4G09020.1AT2G39930.1AT1G03310.2AT1G03310.1
Brachypodium distachyonBradi4g32707.2Bradi4g32707.1Bradi3g40410.2Bradi3g40410.1Bradi2g26170.1
Brassica rapaBra000667Bra005001Bra030528Bra033388
Carica papayaevm.model.supercontig_36.185evm.model.supercontig_485.4evm.model.supercontig_115.45
Capsella rubellaCarubv10003443mCarubv10024947mCarubv10012076m
Chlamydomonas reinhardtiig4436.t1g3160.t1
Citrus clementinaCiclev10000452mCiclev10000347mCiclev10007489mCiclev10023436m
Citrus sinensisorange1.1g009902morange1.1g006791morange1.1g003977morange1.1g011993morange1.1g005976m
orange1.1g003653morange1.1g003901morange1.1g005552morange1.1g047308m
Cucumis sativusCucsa.311690.1Cucsa.281840.2Cucsa.281840.1Cucsa.084930.1
Eucalyptus grandisEucgr.B00043.1Eucgr.C02189.3Eucgr.C02189.2Eucgr.C02189.1Eucgr.K03392.1
Fragaria vescamrna11912.1-v1.0-hybridmrna12022.1-v1.0-hybridmrna27855.1-v1.0-hybrid
Glycine maxGlyma06g10540.2Glyma04g10693.3Glyma04g10693.2Glyma04g10693.1Glyma08g03210.2
Glyma08g03210.1Glyma03g30771.1Glyma19g33620.2
Gossypium raimondiiGorai.009G233800.1Gorai.009G233800.2Gorai.009G233800.3Gorai.012G008800.3Gorai.012G008800.2
Gorai.012G008800.1Gorai.007G134600.3Gorai.007G134600.2Gorai.007G134600.1
Linum usitatissimumLus10036474Lus10021586Lus10000661Lus10027999Lus10017150
Malus domesticaMDP0000119748MDP0000118987MDP0000313388MDP0000185233MDP0000647541
MDP0000258604MDP0000238431
Manihot esculentacassava4.1_001932mcassava4.1_001414m
Medicago truncatulaMedtr3g099500.1Medtr8g101490.1
Mimulus guttatusmgv1a002417mmgv1a001549mmgv1a001869m
Oryza sativaLOC_Os08g40930.1LOC_Os09g29404.3LOC_Os09g29404.1LOC_Os05g32710.1
Panicum virgatumPavirv00034683mPavirv00034682mPavirv00063957mPavirv00032505mPavirv00012813m
Physcomitrella patensPp1s25_63V6.1Pp1s36_254V6.2Pp1s36_254V6.1Pp1s62_201V6.2
Phaseolus vulgarisPhvul.009G033200.1Phvul.002G303600.1Phvul.001G148700.1Phvul.005G040300.1
Picea abiesMA_10431226g0020MA_159157g0180
Populus trichocarpaPotri.002G100900.2Potri.002G100900.4Potri.002G100900.3Potri.002G100900.1Potri.006G070800.3
Potri.006G070800.2Potri.006G070800.1Potri.018G132500.4Potri.018G132500.3Potri.018G132500.2
Potri.018G132500.1Potri.018G132500.5Potri.002G215400.1Potri.002G219900.1
Prunus persicappa001639mppa025097mppa001199m
Ricinus communis29908.m00608929776.m00048828153.m00028728323.m00004135877.m000015
27724.m000018
Setaria italicaSi029005mSi013277m
Selaginella moellendorffii10621875877414611
Sorghum bicolorSb02g027280.3Sb02g027280.2Sb02g027280.1Sb07g027200.1Sb09g019480.1
Thellungiella halophilaThhalv10028487mThhalv10028455mThhalv10028452mThhalv10016275mThhalv10006762m
Vitis viniferaGSVIVT01009087001GSVIVT01035168001GSVIVT01011096001
Volvox carteriVocar20007238mVocar20007651m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)