PlantCAZyme

CAZyme Information

Basic Information
Species	Ricinus communis
Cazyme ID	29250.m000233
Family	GT8
Protein Properties	Length: 375 Molecular Weight: 41831.2 Isoelectric Point: 7.617
Chromosome	Chromosome/Scaffold: 29250 Start: 23715 End: 25131
Description	galacturonosyltransferase-like 2
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

External Links

NCBI Taxonomy

Plaza

CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GT8	83	348	7.00649e-45
NDICSQEAVHVAMTLDFPYLRGTMAAILSIIQHSSCPENLRFHFISSPSSISLHSTITSSFPYLRSQIYTFHTSPVSGLISTSIRAALDSPLNYARNYLA NLLPGCIQKVIYLDSDIILVDDISVLAATPLGEDAVLAAPEYCNANFTSYFTPTFWSNPSLSLIFAGRNACYFNTGVMVIDLERWRQGDYTRKIIEWMEL QKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWAR

Full Sequence
Protein Sequence Length: 375 Download
MPTLKLKLLP PQPPPPPPPT TKLPPPHHHH HHLLSILLLL SITTANAIII PTTSITITTK 60 INQKFKEAPQ FYNSPTCPSL SSNDICSQEA VHVAMTLDFP YLRGTMAAIL SIIQHSSCPE 120 NLRFHFISSP SSISLHSTIT SSFPYLRSQI YTFHTSPVSG LISTSIRAAL DSPLNYARNY 180 LANLLPGCIQ KVIYLDSDII LVDDISVLAA TPLGEDAVLA APEYCNANFT SYFTPTFWSN 240 PSLSLIFAGR NACYFNTGVM VIDLERWRQG DYTRKIIEWM ELQKRMRIYE LGSLPPFLLV 300 FAGNIAPVDH RWNQHGLGGD NFRGLCRDLH PGPVSLLHWS GKGKPWARLD DNRPCPLDAL 360 WAPYDLLQTP FAIES 420

Full Sequence

Protein Sequence Length: 375 Download

MPTLKLKLLP PQPPPPPPPT TKLPPPHHHH HHLLSILLLL SITTANAIII PTTSITITTK    60
INQKFKEAPQ FYNSPTCPSL SSNDICSQEA VHVAMTLDFP YLRGTMAAIL SIIQHSSCPE    120
NLRFHFISSP SSISLHSTIT SSFPYLRSQI YTFHTSPVSG LISTSIRAAL DSPLNYARNY    180
LANLLPGCIQ KVIYLDSDII LVDDISVLAA TPLGEDAVLA APEYCNANFT SYFTPTFWSN    240
PSLSLIFAGR NACYFNTGVM VIDLERWRQG DYTRKIIEWM ELQKRMRIYE LGSLPPFLLV    300
FAGNIAPVDH RWNQHGLGGD NFRGLCRDLH PGPVSLLHWS GKGKPWARLD DNRPCPLDAL    360
WAPYDLLQTP FAIES                                                     420

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
PLN02829	PLN02829	2.0e-11	218	346	129	+ Probable galacturonosyltransferase
PLN02867	PLN02867	4.0e-12	238	364	129	+ Probable galacturonosyltransferase
PLN02659	PLN02659	4.0e-12	229	364	138	+ Probable galacturonosyltransferase
cd06429	GT8_like_1	7.0e-18	255	349	97	+ GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
pfam01501	Glyco_transf_8	2.0e-40	92	350	261	+ Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.

Gene Ontology
GO Term	Description
GO:0016757	transferase activity, transferring glycosyl groups

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	ACW83060.1	0	52	375	24	362	glycosyltransferase family GT8 protein [Populus deltoides]
RefSeq	XP_002269182.1	0	64	375	29	351	PREDICTED: hypothetical protein [Vitis vinifera]
RefSeq	XP_002310780.1	0	54	375	31	352	glycosyltransferase, CAZy family GT8 [Populus trichocarpa]
RefSeq	XP_002327710.1	0	56	374	36	351	glycosyltransferase, CAZy family GT8 [Populus trichocarpa]
RefSeq	XP_002533272.1	0	1	375	1	375	transferase, transferring glycosyl groups, putative [Ricinus communis]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1ss9_A	0.000000007	176	348	84	254	A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc
PDB	1ga8_A	0.00000002	176	348	84	254	A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc
PDB	1g9r_A	0.00000002	176	348	84	254	A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose

Hydropathy

EST Download unfiltered results here

Hit

Length

Start

End

EValue

DY274800

323

375

FC907129

288

371

CK251939

301

359

DY279224

321

371

DY287069

307

357

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_002_00358.1	Aquca_017_00377.1	Aquca_007_00136.1	Aquca_002_01104.1	Aquca_010_00404.1
	Aquca_026_00195.1	Aquca_003_00612.1	Aquca_002_00392.1
Arabidopsis lyrata	486764	490360	476133	905093	906411
	472678	470231	477926	472152	471480
Arabidopsis thaliana	AT3G62660.1	AT4G02130.3	AT4G02130.2	AT4G02130.1	AT3G50760.1
	AT3G28340.1	AT1G70090.2	AT1G70090.1	AT1G24170.1	AT1G02720.2
	AT1G02720.1	AT3G06260.1	AT1G19300.1	AT1G13250.1
Brachypodium distachyon	Bradi1g64830.1	Bradi1g61830.1	Bradi5g16690.1	Bradi1g12560.1	Bradi3g59760.1
	Bradi1g44470.1
Brassica rapa	Bra041026	Bra003504	Bra025325	Bra030163	Bra016237
	Bra039058	Bra012890	Bra012417	Bra024642	Bra020762
	Bra032589	Bra001188	Bra016512	Bra025726	Bra019820
	Bra040231
Carica papaya	evm.model.supercontig_37.85	evm.model.supercontig_151.46	evm.model.supercontig_16.63	evm.model.supercontig_5.324	evm.model.supercontig_14.73
	evm.model.supercontig_1.221	evm.model.supercontig_9.124
Capsella rubella	Carubv10017525m	Carubv10017523m	Carubv10020432m	Carubv10018870m	Carubv10018975m
	Carubv10011392m	Carubv10001309m	Carubv10015151m	Carubv10009529m	Carubv10012618m
	Carubv10010952m
Citrus clementina	Ciclev10020715m	Ciclev10001658m	Ciclev10031574m	Ciclev10031831m	Ciclev10025952m
	Ciclev10020857m	Ciclev10015791m
Citrus sinensis	orange1.1g017643m	orange1.1g042515m	orange1.1g047424m	orange1.1g018567m	orange1.1g018535m
	orange1.1g023261m
Cucumis sativus	Cucsa.205260.1	Cucsa.096860.1	Cucsa.342110.1	Cucsa.101770.1	Cucsa.232430.1
	Cucsa.285670.1	Cucsa.283880.1	Cucsa.084880.1
Eucalyptus grandis	Eucgr.A00485.1	Eucgr.B02574.1	Eucgr.B03054.1	Eucgr.K03408.1	Eucgr.H01923.1
	Eucgr.I01882.1	Eucgr.H01534.1	Eucgr.F01531.1
Fragaria vesca	mrna03873.1-v1.0-hybrid	mrna29514.1-v1.0-hybrid	mrna00730.1-v1.0-hybrid	mrna15079.1-v1.0-hybrid	mrna06069.1-v1.0-hybrid
	mrna01325.1-v1.0-hybrid	mrna27629.1-v1.0-hybrid
Glycine max	Glyma10g01960.1	Glyma02g01880.2	Glyma02g01880.1	Glyma17g36650.1	Glyma06g03770.1
	Glyma01g38520.1	Glyma04g03690.1	Glyma02g11100.1	Glyma02g06640.1	Glyma01g22480.1
	Glyma14g08430.1	Glyma07g38430.1	Glyma17g02330.1	Glyma02g03090.1	Glyma19g01910.1
	Glyma03g37560.1	Glyma19g40180.1	Glyma01g04460.1	Glyma13g04780.1
Gossypium raimondii	Gorai.001G142100.1	Gorai.007G125600.5	Gorai.007G125600.4	Gorai.007G125600.3	Gorai.007G125600.2
	Gorai.007G125600.1	Gorai.009G274300.1	Gorai.008G142800.3	Gorai.008G142800.2	Gorai.008G142800.1
	Gorai.009G094500.1	Gorai.003G017900.1	Gorai.009G205300.1	Gorai.007G207000.2	Gorai.007G207000.1
	Gorai.005G187600.1	Gorai.002G129800.1	Gorai.009G345300.1	Gorai.010G012700.1	Gorai.009G094500.2
	Gorai.007G133400.1	Gorai.011G181200.1	Gorai.008G070000.1	Gorai.005G106100.2	Gorai.005G106100.1
	Gorai.012G058400.1
Linum usitatissimum	Lus10010727	Lus10029215	Lus10010025	Lus10016301	Lus10032728
	Lus10018801	Lus10002440	Lus10030821	Lus10013296	Lus10012765
	Lus10034012	Lus10041489	Lus10034274	Lus10000262	Lus10001461
Malus domestica	MDP0000794936	MDP0000146240	MDP0000856834	MDP0000370712	MDP0000401001
	MDP0000185643	MDP0000489408	MDP0000678218	MDP0000518347	MDP0000124674
	MDP0000467113	MDP0000862557	MDP0000534564	MDP0000315192	MDP0000120125
	MDP0000190839	MDP0000738777	MDP0000282390	MDP0000234929	MDP0000261375
	MDP0000745582
Manihot esculenta	cassava4.1_009251m	cassava4.1_010284m	cassava4.1_010677m	cassava4.1_030032m	cassava4.1_010644m
	cassava4.1_010619m	cassava4.1_030190m	cassava4.1_010034m	cassava4.1_032470m	cassava4.1_027013m
	cassava4.1_010840m	cassava4.1_027039m	cassava4.1_027652m
Medicago truncatula	Medtr6g008900.1	Medtr4g071620.1	Medtr8g078240.1	Medtr7g109210.1	Medtr3g092310.1
	Medtr5g019220.1	Medtr5g036580.1	Medtr1g089820.1
Mimulus guttatus	mgv1a027115m	mgv1a019931m	mgv1a006996m	mgv1a025873m	mgv1a009253m
	mgv1a009521m	mgv1a022129m	mgv11b016267m	mgv1a012428m	mgv1a023917m
Oryza sativa	LOC_Os03g18890.1	LOC_Os04g44850.1	LOC_Os02g50600.1	LOC_Os06g13760.1	LOC_Os03g47530.1
	LOC_Os03g24510.1	LOC_Os07g45260.1	LOC_Os10g31650.1
Panicum virgatum	Pavirv00013322m	Pavirv00014799m	Pavirv00024693m	Pavirv00043544m	Pavirv00057337m
	Pavirv00044356m	Pavirv00029444m	Pavirv00011574m	Pavirv00060955m	Pavirv00006973m
	Pavirv00012530m	Pavirv00040941m	Pavirv00040847m	Pavirv00030626m	Pavirv00044928m
Physcomitrella patens	Pp1s4_405V6.1	Pp1s129_133V6.1	Pp1s229_15V6.2	Pp1s229_15V6.1	Pp1s281_1V6.1
	Pp1s43_42V6.1	Pp1s44_257V6.1	Pp1s78_207V6.2	Pp1s78_207V6.1	Pp1s10_51V6.2
	Pp1s10_51V6.1	Pp1s29_210V6.1
Phaseolus vulgaris	Phvul.007G217100.1	Phvul.009G055600.1	Phvul.003G097800.1	Phvul.002G026000.1	Phvul.003G251200.1
	Phvul.001G016900.1	Phvul.003G027400.1	Phvul.007G168700.1	Phvul.002G077400.1	Phvul.001G211100.1
	Phvul.004G022700.1
Picea abies	MA_10432403g0010	MA_130934g0010	MA_88535g0010	MA_766299g0010	MA_10429227g0010
Populus trichocarpa	Potri.010G038300.1	Potri.014G040300.1	Potri.002G200200.1	Potri.008G116900.1	Potri.002G132900.1
	Potri.014G125000.1	Potri.007G031700.1	Potri.010G129400.1	Potri.005G128000.1	Potri.008G018100.1
	Potri.008G192600.1	Potri.010G242300.1
Prunus persica	ppa007216m	ppa007794m	ppa007777m	ppa006911m	ppa007313m
	ppa021809m	ppa007162m	ppa008099m
Ricinus communis	29822.m003423	29703.m001539	30170.m013987	29738.m001048	29736.m002104
	29726.m003937	29986.m001675
Setaria italica	Si039250m	Si012092m	Si017541m	Si006389m	Si036413m
	Si040204m	Si030368m
Selaginella moellendorffii	234804	437525
Sorghum bicolor	Sb01g037870.1	Sb06g023460.1	Sb10g008830.1	Sb04g028460.1	Sb01g012060.1
	Sb02g041310.1	Sb01g034770.1
Thellungiella halophila	Thhalv10006057m	Thhalv10006055m	Thhalv10028760m	Thhalv10028758m	Thhalv10004449m
	Thhalv10018687m	Thhalv10008011m	Thhalv10007867m	Thhalv10021020m	Thhalv10010596m
	Thhalv10008059m	Thhalv10007975m
Vitis vinifera	GSVIVT01028072001	GSVIVT01020141001	GSVIVT01009639001

Orthologous Group

Species

Aquilegia coerulea

Arabidopsis lyrata