Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29492.m000070 |
Family | GH10 |
Protein Properties | Length: 473 Molecular Weight: 53345 Isoelectric Point: 5.2751 |
Chromosome | Chromosome/Scaffold: 29492 Start: 677 End: 2778 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 129 | 408 | 0 |
SKDFPLGSSISSKILGNLPYQNWFVERFNAAVFENELKWYATEPEQGKVNYTIPDKMLELLRANQITGRGHNIFWEDPKYTPKWVQNLSGDALKSAVNSR IQSLMSKYKEEFIHWDVSNEMLHFDFYEQRLGPDATLHFYETAHQADPLATLFMNEFNVVETCSDVNSTVDTYISRLRELEGGGVFMDGIGLESHFSVPN LPLMRGILDKLATLGLPIWLTEVDISKNFDHKSQGIYLEQVLREGFSHPAVNGIMLWTALHSDGCYQMCLTDNNFQNLPA |
Full Sequence |
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Protein Sequence Length: 473 Download |
MIWHGCKTVW VRIQGAESGL VTASLTTDNE RNNCVGTVFA NTECWSFLKG GFILDAPSNL 60 SILYFKNSAD SNINIAIASA SLQPFTDHQW RTNQQYIVNS VRKRAVTIHV SDNHGDKLEG 120 AAITIEQISK DFPLGSSISS KILGNLPYQN WFVERFNAAV FENELKWYAT EPEQGKVNYT 180 IPDKMLELLR ANQITGRGHN IFWEDPKYTP KWVQNLSGDA LKSAVNSRIQ SLMSKYKEEF 240 IHWDVSNEML HFDFYEQRLG PDATLHFYET AHQADPLATL FMNEFNVVET CSDVNSTVDT 300 YISRLRELEG GGVFMDGIGL ESHFSVPNLP LMRGILDKLA TLGLPIWLTE VDISKNFDHK 360 SQGIYLEQVL REGFSHPAVN GIMLWTALHS DGCYQMCLTD NNFQNLPAGD VVDNLLKEWK 420 TGNINGYTDE HGSFSFSGFL GEYRISVQFG NAASNSTFSL SRSLETKHFN IQL 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 2.0e-35 | 127 | 354 | 241 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 3.0e-54 | 126 | 415 | 311 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 2.0e-74 | 165 | 412 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94922.1 | 0 | 10 | 473 | 7 | 470 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI37893.1 | 0 | 6 | 473 | 158 | 625 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 6 | 473 | 92 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 6 | 473 | 82 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 1 | 473 | 1 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2g4f_B | 8e-28 | 134 | 353 | 16 | 239 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 2g4f_A | 8e-28 | 134 | 353 | 16 | 239 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 2g3j_A | 8e-28 | 134 | 353 | 16 | 239 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 2g3i_A | 8e-28 | 134 | 353 | 16 | 239 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
PDB | 1v6y_A | 8e-28 | 134 | 385 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES803339 | 253 | 119 | 371 | 0 |
EL361489 | 267 | 170 | 435 | 0 |
GR953916 | 292 | 108 | 399 | 0 |
DY024035 | 263 | 188 | 447 | 0 |
CX705541 | 237 | 237 | 473 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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