Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 29629.m001356 |
Family | CE8 |
Protein Properties | Length: 383 Molecular Weight: 42848.5 Isoelectric Point: 5.7071 |
Chromosome | Chromosome/Scaffold: 29629 Start: 40462 End: 42508 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 85 | 377 | 0 |
IVVDRNGEGDSLTVQGAIDMVPESNPHRVKIYILPGIYREKVLVPSTKPYISFIGKESQCADTVITWNNKASDMDSNGVELGTYRSASVTIESDYFCATG VTFENTVVAEPGGYGMQAVALRVSGDKAFFHKVRILGTQDTLLDETGSHFFYQCHIQGSVDFIFGKGRSLFQDCVLQSTAKRSGAIAAHHRDTPFDDSGF SFVGCVINGTGKILLGRAWGNYSRAIYSYCFIDDVITPPGWSDWNYPDRQKTVFFGEYECSGRGADTGGRVPWSKTFSYEEVRPFLDMQFING |
Full Sequence |
---|
Protein Sequence Length: 383 Download |
MSVLGFNAYL SQLLIIIEKR GKSMERSVLG VSVVVYICFL GSFQVVFSQS GVVNMKDFIS 60 WDDMKVDEDK AKLNSRYDYN RSRIIVVDRN GEGDSLTVQG AIDMVPESNP HRVKIYILPG 120 IYREKVLVPS TKPYISFIGK ESQCADTVIT WNNKASDMDS NGVELGTYRS ASVTIESDYF 180 CATGVTFENT VVAEPGGYGM QAVALRVSGD KAFFHKVRIL GTQDTLLDET GSHFFYQCHI 240 QGSVDFIFGK GRSLFQDCVL QSTAKRSGAI AAHHRDTPFD DSGFSFVGCV INGTGKILLG 300 RAWGNYSRAI YSYCFIDDVI TPPGWSDWNY PDRQKTVFFG EYECSGRGAD TGGRVPWSKT 360 FSYEEVRPFL DMQFINGDEW LRL |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 4.0e-102 | 59 | 381 | 346 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 9.0e-104 | 78 | 382 | 305 | + putative pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-111 | 83 | 381 | 301 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-121 | 82 | 383 | 304 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 0 | 22 | 383 | 362 | + pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5.60519e-45 | 85 | 382 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-35 | 86 | 382 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 0.00000000000003 | 97 | 262 | 20 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.00000000000003 | 97 | 262 | 20 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.00000000000003 | 97 | 262 | 20 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |