y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29635.m000452 |
Family | CE8 |
Protein Properties | Length: 316 Molecular Weight: 35297.9 Isoelectric Point: 7.3647 |
Chromosome | Chromosome/Scaffold: 29635 Start: 79120 End: 82416 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 296 | 0 |
LTVAQDGSGNYRTVQEAIDAVPLCNTGRTVIRVAPGIYRQPVYVPKTKNLITLAGLNPENTVLTWDNTATKIDHHQASRVIGTGTFGCGSVIVEGEDFIA ENITFENSSPEGSGQAVAVRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQESTGYVFLR CVITGNGGTSYAYLGRPWGPFGRVVFAYTYMDQCVRHVGWNNWGKVENERSACFYEYRCFGPGSCPSKRVTWARELIDEEAEQFLVHGFID |
Full Sequence |
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Protein Sequence Length: 316 Download |
MACRVLTVAQ DGSGNYRTVQ EAIDAVPLCN TGRTVIRVAP GIYRQPVYVP KTKNLITLAG 60 LNPENTVLTW DNTATKIDHH QASRVIGTGT FGCGSVIVEG EDFIAENITF ENSSPEGSGQ 120 AVAVRVTADR CAFYNCRFLG WQDTLYLHYG KQYLKDCYIE GSVDFIFGNS TALLEHCHIH 180 CKSAGFITAQ SRKSSQESTG YVFLRCVITG NGGTSYAYLG RPWGPFGRVV FAYTYMDQCV 240 RHVGWNNWGK VENERSACFY EYRCFGPGSC PSKRVTWARE LIDEEAEQFL VHGFIDPDAQ 300 RPWLAQRMAL RIPYTA 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 4.0e-91 | 7 | 298 | 310 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 2.0e-94 | 4 | 296 | 301 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-98 | 5 | 296 | 294 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 5.0e-108 | 3 | 296 | 302 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 316 | 316 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 4 | 316 | 5 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 316 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 1 | 316 | 1 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 6 | 304 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2.99878e-43 | 8 | 277 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 7e-25 | 5 | 289 | 7 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 7e-25 | 5 | 289 | 7 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 8e-25 | 5 | 289 | 7 | 328 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY292729 | 314 | 1 | 313 | 0 |
DY292725 | 301 | 1 | 301 | 0 |
GR994392 | 306 | 1 | 306 | 0 |
ES794113 | 290 | 1 | 290 | 0 |
ES794113 | 32 | 285 | 316 | 0.0004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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