| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29648.m002008 |
| Family | GH35 |
| Protein Properties | Length: 771 Molecular Weight: 86861.4 Isoelectric Point: 9.2147 |
| Chromosome | Chromosome/Scaffold: 29648 Start: 681072 End: 687761 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 69 | 319 | 0 |
| EYDFDGRKDLVKFLLEVQAQGLYAALRIGPFIEGEWTYGGLPFWLHDVSGIVFRSDNEPFKKHMQRFVTKIVNMMKYNQLYASQGGPIIISQIENEYQNV ETAFHEKGSRYVHWAANMAVRLNTGVPWVMCKQTDAPDPVINTCNGMRCGETFAGPNSPNKPSMWTENWTSFYQVFGGEPYIRTAEDIAFHVALFIARNG SYVNYYMYHGGTNFGRTGSAFVTTSYYDQAPLDEYGLIRQPKWGHLKDLHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 771 Download |
| MEQLQVHYYY YSKMVCMLFW LGFAFLSMAI ITVQGKAGNV TYDGRSLIIN GEHRILFSGS 60 IHYPRSTPEY DFDGRKDLVK FLLEVQAQGL YAALRIGPFI EGEWTYGGLP FWLHDVSGIV 120 FRSDNEPFKK HMQRFVTKIV NMMKYNQLYA SQGGPIIISQ IENEYQNVET AFHEKGSRYV 180 HWAANMAVRL NTGVPWVMCK QTDAPDPVIN TCNGMRCGET FAGPNSPNKP SMWTENWTSF 240 YQVFGGEPYI RTAEDIAFHV ALFIARNGSY VNYYMYHGGT NFGRTGSAFV TTSYYDQAPL 300 DEYGLIRQPK WGHLKDLHAK IKSCSKTLIR GTHQTFPLGR LQEAYVFREK SGDCVAFLVN 360 NDGRRDVTVR FQNRSYELPH KSISILPDCK SITFNTAKVN TQYATRSATL SQEFSSVGKW 420 EEYKETVATF DSTSLRAKTL LDHLSTTKDT SDYLWYTFRF QNHFSRPQST LRAYSRGHVL 480 HAYVNGVYAG SAHGSHESTS FTLENSVRLK NGTNNVALLS VTVGLPDSGA YLERRVAGLH 540 RVRIQNKDFT TYSWGYQVGL LGEKLQIYTD NGLNKVSWNE FRGTTQPLTW YKTQFDAPAG 600 SDPIALNLHS MGKGEAWVNG QSIGRYWVSF STSKGNPSQT RYHIPQSFVK PTGNLLVLLE 660 EEKGYPPGIT VDSISISKVC GHVSESHKSV VQLSCPPNRN ISRILFSSFG TPEGNCNQYA 720 IGKCHSSNSR AIVEKACIGK TKCIILRSNR FFGGDPCPGI RKGLLVDAKC T 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 4.0e-7 | 431 | 518 | 92 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| pfam02140 | Gal_Lectin | 3.0e-20 | 693 | 770 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 8.0e-124 | 46 | 321 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 12 | 771 | 845 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18990.1 | 0 | 14 | 771 | 5 | 817 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI18991.1 | 0 | 41 | 770 | 33 | 820 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 39 | 771 | 7 | 798 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306647.1 | 0 | 39 | 771 | 1 | 764 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520337.1 | 0 | 1 | 771 | 1 | 771 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-25 | 46 | 328 | 14 | 336 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 5e-16 | 69 | 341 | 72 | 354 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 5e-16 | 69 | 341 | 72 | 354 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 5e-16 | 69 | 341 | 72 | 354 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
