CAZyme Information

Basic Information
SpeciesRicinus communis
Cazyme ID29661.m000924
FamilyGH43
Protein PropertiesLength: 499 Molecular Weight: 56945.6 Isoelectric Point: 9.211
ChromosomeChromosome/Scaffold: 29661 Start: 261855 End: 268056
DescriptionArabinanase/levansucrase/invertase
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH431924162.9e-34
  SKTYYWYGEYKDGPTYHAHKKGAARVDIIGVGCYSSKDLWTWKNEGIVLAAEDMNETHDLHKSNVLERPKVIHNDKTGKYVMWMHIDDVNYTKAAVGIAI
  SDSPTGPFDYVHSKRPHGFESRDMTIFKDDDGVAYLIYSSEDNSELHIGPLTDNYLDVTHVMRRILIGQHREAPALFKHQGTYYMITSGCTGWAPNEALA
  HAAESIMGPWETMGNPCIGGNKIFR
Full Sequence
Protein Sequence     Length: 499     Download
MRGFFIVNDT VNSWSGTGQH YLGDKKKRSE KMRIRNKYRK STTFPCNAGG RCSMSAVLWS    60
LVGFLLFLHL CSLVGYNGGK SGEIQFRASR HPVIRELEEV EEENIQIPPP RGRRSPRAAK    120
RRPKRPTTLI DEFLDENSQL RHVFFPGMKN AIDPTNDAGN NSFYYHPGRI WLDTEGNPIQ    180
AHGGGILYDE RSKTYYWYGE YKDGPTYHAH KKGAARVDII GVGCYSSKDL WTWKNEGIVL    240
AAEDMNETHD LHKSNVLERP KVIHNDKTGK YVMWMHIDDV NYTKAAVGIA ISDSPTGPFD    300
YVHSKRPHGF ESRDMTIFKD DDGVAYLIYS SEDNSELHIG PLTDNYLDVT HVMRRILIGQ    360
HREAPALFKH QGTYYMITSG CTGWAPNEAL AHAAESIMGP WETMGNPCIG GNKIFRLTTF    420
FAQSTFVIPL TGLPGSFIFM ADRWNPADLR DSRYVWLPLI VGGRADRPLE FNFGFPVWSR    480
VSIYWHRKWR LPSGWRGLK 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd08990GH43_AXH_like2.0e-19224405196+
cd09004GH43_bXyl7.0e-20223406196+
cd08978GH_F2.0e-48194459277+
cd08985GH43_61.0e-129179459282+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACU19498.104949915465unknown [Glycine max]
EMBLCBI33680.10324991434unnamed protein product [Vitis vinifera]
RefSeqNP_190557.10324941460glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqNP_201555.209149265466glycosyl hydrolase family protein 43 [Arabidopsis thaliana]
RefSeqXP_002525277.1014991499beta-glucanase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F016845945328A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB3vt2_E016845945328A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB3vt2_D016845945328A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB3vt2_C016845945328A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
PDB3vt2_B016845945328A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome
Transmembrane Domains
StartEnd
5678
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GO8561533351624960
GO3743623441604980
EY7037302951764700
GO8017532971994950
GT7395993011634630
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Fragaria vescamrna05759.1-v1.0-hybrid
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m000015
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny