| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29681.m001332 |
| Family | CBM20 |
| Protein Properties | Length: 765 Molecular Weight: 85452.8 Isoelectric Point: 5.3355 |
| Chromosome | Chromosome/Scaffold: 29681 Start: 174006 End: 178669 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM20 | 544 | 629 | 2e-23 |
| IHVKFQLQKQCMFGDQFLLVGDDPMLGLWNPADAIPMNWSDEHIWSTELDVPIESTIQFKFILKQCSGEIFWQPGPDRIFKSWESN | |||
| Full Sequence |
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| Protein Sequence Length: 765 Download |
| MASLNSPLVS IPLRPNHSIL TVPNGRPVTS HSQTLSLIDQ CTNLKHLKEL HATILRSGLF 60 FHPYNASKLF SVAALSSFSS LDYARKVFEE ISQPNLYTWN TLIRAFASSP EPIHSLLIFI 120 RMLYDSPDFP NKFTFPFVIK AAAGVASLPF SQAIHGMAIK ASLGSDLFIL NSLIHCYASC 180 GDLDSAYSVF VKIEEKDVVS WNSMIKGFVL GGCPDKALEL FQLMKAENVR PNDVTMVGVL 240 SACAKKMDLE FGRRVCHYIE RNGINVNLTV SNAMLDMYVK NGSLEDARRL FDKMEEKDIF 300 SWTTMIDGYA KRRDFDAARS VFDAMPRQDI SAWNVLISAY EQDGKPKEAL AIFHELQLSK 360 TAKPDEVTLV STLSACAQLG AIDIGGWIHV YIKKQDIKLN CHLTTSLIDM YSKCGEVEKA 420 LDIFYSVDRR DVFVWSAMIA GLAMHGRGRA AIDLFFEMQE TKVRPNAVTF TNLLCACSHT 480 GLVNEGRMFF NQMESSTFKR LQFHDLVLSR TIAKSHVAYD SAEVSVGFEN AVAEIPSIKT 540 SKRIHVKFQL QKQCMFGDQF LLVGDDPMLG LWNPADAIPM NWSDEHIWST ELDVPIESTI 600 QFKFILKQCS GEIFWQPGPD RIFKSWESNG TIIISEDWEN SEAQKIMEEK MESVINHDLT 660 PTDAENITNQ SEGLLANMNN DIMFSGNVAF AEEKLIDDNE LFTRGSSTLK QELPKKTLFS 720 YEEGNVLVPG ITPLQAASTN EFGSITANSS FGVADAPFGV DLAKE |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03077 | PLN03077 | 7.0e-29 | 82 | 348 | 273 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 3.0e-36 | 202 | 487 | 286 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 1.0e-46 | 171 | 498 | 328 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 5.0e-76 | 84 | 487 | 404 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 3.0e-83 | 84 | 494 | 412 | + Protein ECB2; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:2001070 | starch binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002279360.1 | 0 | 1 | 494 | 1 | 498 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002279360.1 | 1e-21 | 82 | 294 | 320 | 533 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314110.1 | 0 | 1 | 494 | 1 | 493 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314110.1 | 2e-22 | 82 | 294 | 315 | 528 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525630.1 | 0 | 1 | 765 | 1 | 765 | pentatricopeptide repeat-containing protein, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uks_B | 0.000008 | 538 | 639 | 581 | 685 | A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN Glucanotransferase Complexed With A Pseudo-Maltotetraose Derived From Acarbose |
| PDB | 1uks_A | 0.000008 | 538 | 639 | 581 | 685 | A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN Glucanotransferase Complexed With A Pseudo-Maltotetraose Derived From Acarbose |
| PDB | 1v3l_B | 0.000009 | 538 | 639 | 581 | 685 | A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN Glucanotransferase Complexed With A Pseudo-Maltotetraose Derived From Acarbose |
| PDB | 1v3l_A | 0.000009 | 538 | 639 | 581 | 685 | A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN Glucanotransferase Complexed With A Pseudo-Maltotetraose Derived From Acarbose |
| PDB | 1v3j_B | 0.000009 | 538 | 639 | 581 | 685 | A Chain A, Crystal Structure Of F283l Mutant Cyclodextrin Glycosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG446473 | 274 | 82 | 355 | 0 |
| EG446423 | 249 | 82 | 330 | 0 |
| EG446473 | 318 | 178 | 492 | 2e-28 |
| EG446423 | 284 | 178 | 458 | 2e-25 |
| EG446473 | 177 | 318 | 494 | 2e-18 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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