Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29693.m002052 |
Family | GT5 |
Protein Properties | Length: 998 Molecular Weight: 113268 Isoelectric Point: 6.0145 |
Chromosome | Chromosome/Scaffold: 29693 Start: 624176 End: 632384 |
Description | starch synthase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 501 | 986 | 0 |
HVIHIAAEMAPVAKVGGLGDVVAGLGKALQKRGHLVEIILPKYDCMQYNGIGNLRALDVTVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPDKFFWRGQ FYGEHDDFKRFSFFSRAALELLHQSGKKPDIIHSHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTAPASELASCGLDVHHLNRPDRMQDNLAH DRINPVKGAVVFSNIVTTVSPTYAQEVRTAEGGRGLHSTLNFHAKKFIGILNGIDTDSWNPATDTCLKVQYSANDLQAKAENKLATRRLLGLSTADARQP LVGCITRLVPQKGVHLIRHAIYRTVELGGQFILLGSSPVAQIQREFEGIANHFQNHEHVRLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYG SIPIARKTGGLNDSVFDVDDVTIPLQFQNGFTFLNPDEQGISGALERAFNYYRNNPEGWQKLVQKDMNIDFSWESSAAQYEELYSK |
Full Sequence |
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Protein Sequence Length: 998 Download |
MATKPASWFL SQGYTVFNCN HNNHYHHNHN KQTNVRFFLP PHRLLPTSCK MRQRNLSSSQ 60 NKRQQVKKAS PEIPPTGGDF ESSSGDDIDD SEVALSSLDV KSVHYTSAKD EKSNTNAEHA 120 QLGDAKDLDN LTQEMKSLGI YGGEELSSIP DEIKSSGLKI DGGEQLSRVQ LEDLIGMIRN 180 AEKNILLLNQ ARVNALEDLQ RILAEKEILQ GEINILEMRL AETDARMKVA AQEKIHVDLM 240 EDQLEKLRNE LAYRSENQSR LLNEDVPLLQ DTTLHSLSEE LNSLREENTS LKNDIEALKL 300 ELSNVKDTDE HLWEKVETLQ ALLDKATKQA DQAILVLQQN QELRKKVDKL EESLEEANAY 360 KLSSEKLQQY NEFMQQKMKL LEERLQRSDE EINSYVSLYQ ESVQEFQDML NIVKEESKKK 420 ALDEPVNDMP WEFWSHLLLM IDGWLLEKKI SADDAKLLRD MVQKRDRRIH DTYFECRQKN 480 ENEAISMFLK LTSSPSSPGL HVIHIAAEMA PVAKVGGLGD VVAGLGKALQ KRGHLVEIIL 540 PKYDCMQYNG IGNLRALDVT VESYFDGKLY KNKIWVGTIE GLPVYFIEPH HPDKFFWRGQ 600 FYGEHDDFKR FSFFSRAALE LLHQSGKKPD IIHSHDWQTA FVAPLYWDLY APKGLNSARI 660 CFTCHNFEYQ GTAPASELAS CGLDVHHLNR PDRMQDNLAH DRINPVKGAV VFSNIVTTVS 720 PTYAQEVRTA EGGRGLHSTL NFHAKKFIGI LNGIDTDSWN PATDTCLKVQ YSANDLQAKA 780 ENKLATRRLL GLSTADARQP LVGCITRLVP QKGVHLIRHA IYRTVELGGQ FILLGSSPVA 840 QIQREFEGIA NHFQNHEHVR LILKYDDSLA HSIYAASDMF IIPSIFEPCG LTQMIAMRYG 900 SIPIARKTGG LNDSVFDVDD VTIPLQFQNG FTFLNPDEQG ISGALERAFN YYRNNPEGWQ 960 KLVQKDMNID FSWESSAAQY EELYSKSVAR AKAAVNRT |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02316 | PLN02316 | 6.0e-132 | 498 | 984 | 494 | + synthase/transferase | ||
PRK00654 | glgA | 1.0e-178 | 500 | 990 | 493 | + glycogen synthase; Provisional | ||
PLN02939 | PLN02939 | 0 | 32 | 997 | 1005 | + transferase, transferring glycosyl groups | ||
TIGR02095 | glgA | 0 | 500 | 987 | 491 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 501 | 986 | 488 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACT09058.1 | 0 | 30 | 994 | 21 | 998 | starch synthase IV precursor [Solanum lycopersicum] |
RefSeq | NP_193558.3 | 0 | 301 | 998 | 343 | 1040 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002274716.1 | 0 | 1 | 994 | 1 | 1008 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298514.1 | 0 | 148 | 997 | 9 | 887 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519725.1 | 0 | 1 | 998 | 1 | 998 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rzv_B | 0 | 500 | 991 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 0 | 500 | 991 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 0 | 500 | 991 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 1rzu_A | 0 | 500 | 991 | 1 | 479 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 3guh_A | 0 | 500 | 986 | 1 | 475 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO851132 | 333 | 575 | 907 | 0 |
EG664148 | 262 | 530 | 791 | 0 |
CF828776 | 286 | 625 | 910 | 0 |
GW865616 | 298 | 606 | 903 | 0 |
EL448877 | 316 | 428 | 743 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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