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Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29733.m000746 |
Family | GH31 |
Protein Properties | Length: 874 Molecular Weight: 100493 Isoelectric Point: 7.9636 |
Chromosome | Chromosome/Scaffold: 29733 Start: 296626 End: 301348 |
Description | Glycosyl hydrolases family 31 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH31 | 392 | 859 | 0 |
IIYGNSPSDLIERLTETIGRPPELPKWIISGAVIGMQGGTEAVRRVWDELKAYKVPISAFWLQDWVGQRETFIGSQLWWNWEVDTTRYNGWKQLIQDLAA QHIKMMTYCNPCLAPTDEKPNRKRNLFEEAKKLGILVKDEHGEPYMVPNTAFDVGMLDLTHPDTASWFKQILQEMVDDGVRGWMADFGEGLPVDATLYSG EDPISAHNRYPELWAQINREFVEEWKTNLVGKEREDPEEALVFFMRAGFRDSPKWGMLFWEGDQMVSWQANDGIKSAVVGLLSGGFSGYALNHSDIGGYC AVNMPFVKYHRSEELLMRWMELNAFTTVFRTHEGNKPSCNSQFYSNDKTLSHFARCAKMYKAWYFYRIQLVKEASQKGLPVCRHLFIHYPNDRHVHNLSY QQFLVGTEILVVPVLDKGKQNVKVYFPEGETCSWKHVWSRKLFTAQDSETWLDAPIGYPAVFIRDGSF |
Full Sequence |
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Protein Sequence Length: 874 Download |
MATIKITKRH KKHLNNPFPS SPRSLPFIQG SLLFNSQTVP SHQIFPVGRD FQLLCSTNNG 60 GYISVSHQSQ PTRALWSSIP GQAFVSTAVA ETEVEESRGS FVIKDKNVLL VCDHQSIDGI 120 RVINQLDDIQ LEEASDLDSS PGYSSFDLKK DLNDTQFPLL LITGRLFSKT SKKRTPEYGI 180 YQDIEFNTWG PPTSARYWFL LDQKNINQIG FQVRVGQPNF EFHPRTSPTR LGKYQRLRSK 240 LRRIRKQRLG WFRFFTRPRG FFAVTSLEET EMKVPRLTDF NRICLSYSSE ANESFYGFGE 300 QFSHMDFKGK KVPIFVQEQG IGRGDQPITF AANLVSYRAG GDWSTTYAPS PFYMTSKMRS 360 LYLEGYDYSV FDLTRHDRVQ IQIHSSSAQG RIIYGNSPSD LIERLTETIG RPPELPKWII 420 SGAVIGMQGG TEAVRRVWDE LKAYKVPISA FWLQDWVGQR ETFIGSQLWW NWEVDTTRYN 480 GWKQLIQDLA AQHIKMMTYC NPCLAPTDEK PNRKRNLFEE AKKLGILVKD EHGEPYMVPN 540 TAFDVGMLDL THPDTASWFK QILQEMVDDG VRGWMADFGE GLPVDATLYS GEDPISAHNR 600 YPELWAQINR EFVEEWKTNL VGKEREDPEE ALVFFMRAGF RDSPKWGMLF WEGDQMVSWQ 660 ANDGIKSAVV GLLSGGFSGY ALNHSDIGGY CAVNMPFVKY HRSEELLMRW MELNAFTTVF 720 RTHEGNKPSC NSQFYSNDKT LSHFARCAKM YKAWYFYRIQ LVKEASQKGL PVCRHLFIHY 780 PNDRHVHNLS YQQFLVGTEI LVVPVLDKGK QNVKVYFPEG ETCSWKHVWS RKLFTAQDSE 840 TWLDAPIGYP AVFIRDGSFV GETFLENLRT LGIL 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06593 | GH31_xylosidase_YicI | 4.0e-32 | 410 | 728 | 325 | + YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes. | ||
pfam01055 | Glyco_hydro_31 | 3.0e-80 | 392 | 858 | 477 | + Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases. | ||
COG1501 | COG1501 | 6.0e-88 | 280 | 858 | 595 | + Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | ||
cd06594 | GH31_glucosidase_YihQ | 2.0e-171 | 410 | 745 | 337 | + YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. | ||
PRK10426 | PRK10426 | 0 | 259 | 858 | 602 | + alpha-glucosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD81144.1 | 0 | 5 | 874 | 15 | 932 | alpha-glucosidase -like [Oryza sativa Japonica Group] |
EMBL | CBI30134.1 | 0 | 1 | 874 | 35 | 905 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266626.1 | 0 | 1 | 874 | 1 | 871 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308887.1 | 0 | 1 | 874 | 1 | 875 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522166.1 | 0 | 1 | 874 | 1 | 874 | alpha-xylosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4ba0_A | 8e-32 | 253 | 860 | 111 | 672 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 4b9z_A | 8e-32 | 253 | 860 | 111 | 672 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 4b9y_A | 8e-32 | 253 | 860 | 111 | 672 | A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In Glycoside Hydrolase Family 31 |
PDB | 1we5_F | 2e-31 | 293 | 861 | 160 | 670 | A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli |
PDB | 1we5_E | 2e-31 | 293 | 861 | 160 | 670 | A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia Coli |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY975686 | 282 | 478 | 759 | 0 |
DV133191 | 258 | 463 | 720 | 0 |
JG471720 | 268 | 380 | 647 | 0 |
DT522737 | 244 | 631 | 874 | 0 |
CN524335 | 254 | 380 | 633 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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