Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 29736.m002041 |
Family | AA5 |
Protein Properties | Length: 567 Molecular Weight: 63373.2 Isoelectric Point: 7.3501 |
Chromosome | Chromosome/Scaffold: 29736 Start: 289132 End: 290835 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA5 | 41 | 567 | 0 |
GGRWVLLQESIGISAMHIQVLKNNKVIMFDRTDFGHSNLSLPYGKCRFNDEAVMLDCTAHSVLYDIATNTFRPLMIITNTWCSSGSLDSNGVLVQTGGDG KGERVVRTFTPCDDDSCDWVELSNSSSTLLNRRWYSSNQILPDGRIIIVGGRRVFTYEFYPKGSSLVRDNMTLPFLVKTRDPLEENNLYPFLHLLPDGNL FIFANNRSILFDYSRNLVIKEFPVLPGGSRNFPCTGSSVLLPLRINRGNGVGVNNYMAEAEVMVCGGSQPGAYLKAHLENIYMEASRTCGRLKVTDPNPE WVIEFMPMPRIMNDLLLLPTGDVIIINGAANGSAGWNDAVNPVFHPVLYLTEADPTQRFIVLNPTTIPRMYHSTAALLPDGRILVGGSNPHPTYNFTAYP YRTEMSLEAFYPPYLDSIHAPLRPSILTVEGAVSYNWMFSVTFVLTLYREDLGIGVKLMTASFNTHSFGMNQRMIVLKVVSVWRLSEFAHKVNVVGPTNV NVAPPGYYMLFVVHAGIPSHAVWVKVQ |
Full Sequence |
---|
Protein Sequence Length: 567 Download |
MSIMIKIPSI LIIFPLALTF FTLSTSQNLP YMQPYFSMIT GGRWVLLQES IGISAMHIQV 60 LKNNKVIMFD RTDFGHSNLS LPYGKCRFND EAVMLDCTAH SVLYDIATNT FRPLMIITNT 120 WCSSGSLDSN GVLVQTGGDG KGERVVRTFT PCDDDSCDWV ELSNSSSTLL NRRWYSSNQI 180 LPDGRIIIVG GRRVFTYEFY PKGSSLVRDN MTLPFLVKTR DPLEENNLYP FLHLLPDGNL 240 FIFANNRSIL FDYSRNLVIK EFPVLPGGSR NFPCTGSSVL LPLRINRGNG VGVNNYMAEA 300 EVMVCGGSQP GAYLKAHLEN IYMEASRTCG RLKVTDPNPE WVIEFMPMPR IMNDLLLLPT 360 GDVIIINGAA NGSAGWNDAV NPVFHPVLYL TEADPTQRFI VLNPTTIPRM YHSTAALLPD 420 GRILVGGSNP HPTYNFTAYP YRTEMSLEAF YPPYLDSIHA PLRPSILTVE GAVSYNWMFS 480 VTFVLTLYRE DLGIGVKLMT ASFNTHSFGM NQRMIVLKVV SVWRLSEFAH KVNVVGPTNV 540 NVAPPGYYML FVVHAGIPSH AVWVKVQ |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 4.0e-23 | 463 | 566 | 106 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 6.0e-26 | 458 | 566 | 110 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 3.0e-118 | 56 | 307 | 255 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF43943.1 | 0 | 16 | 566 | 15 | 564 | AC012188_20 Weak similarity to glyoxal oxidase (glx2) from Phanerochaete chrysosporium gb |
RefSeq | NP_172895.1 | 0 | 16 | 563 | 15 | 561 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002269734.1 | 0 | 2 | 567 | 318 | 874 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312784.1 | 0 | 23 | 566 | 1 | 543 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520142.1 | 0 | 1 | 567 | 1 | 567 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eib_A | 4e-17 | 122 | 566 | 228 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2eic_A | 5e-17 | 122 | 566 | 228 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2eid_A | 5e-17 | 122 | 566 | 228 | 637 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2vz3_A | 7e-17 | 122 | 566 | 228 | 637 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2vz1_A | 7e-17 | 122 | 566 | 228 | 637 | A Chain A, Galactose Oxidase W290g Mutant |