| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29738.m001049 |
| Family | CBM57 |
| Protein Properties | Length: 674 Molecular Weight: 74454.2 Isoelectric Point: 5.6592 |
| Chromosome | Chromosome/Scaffold: 29738 Start: 436267 End: 443278 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 207 | 354 | 1.3e-23 |
| NDTDNFGRSWQSDLEFRTPTTTKTMAFRSLSTREKISGTDQPPNYFPMKLYQTAVTGNGALEYELTVDAKLDYLLWFHFAEIDSTVTKKGQRVFDVVVND KNASRVDIFAAVGSFAAYSFSYAVRNLSNGALTVKIVPHIGAPLISGI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 674 Download |
| MSLFFVSFFL FFSSSLSFPY DISYYIDCGG PTNTTDPFNT TWLSDRFFTG GSTSVVSEPL 60 HFRFPQEKNL RYFPLSSGKK NCYILPLPNG RYYIRTFTVY DNYDGKLHSP SFDVSVEGTL 120 VFSWRSPWSE NLARDGAYSD LFTFIDDGEA DICFYSIATD PPVIGSLEIR QVDPASYDSI 180 TVGNNSILVN YGRLSCGSVQ WGPGFSNDTD NFGRSWQSDL EFRTPTTTKT MAFRSLSTRE 240 KISGTDQPPN YFPMKLYQTA VTGNGALEYE LTVDAKLDYL LWFHFAEIDS TVTKKGQRVF 300 DVVVNDKNAS RVDIFAAVGS FAAYSFSYAV RNLSNGALTV KIVPHIGAPL ISGIENYALV 360 PNDISTAPDQ VAAMRALKES LRVPDRMGWN GDPCAPTNWD AWEGVTCHPN KNGTALVISQ 420 IDLGSQGLKG YINDQISQLS NLVSLNLSSN SLGGMLPPGL GHKSLMRLDL SNNQFSGPIP 480 ESLASSSLQL VLLHNNLLEG RVQEELYSIG LHGGTIDLSG NKGLCGVPSL PQCSLFWENG 540 HLSTGGKVGI ALSSILVISV LLIVVYIYIK RSRNDYDFAP PHDLMSKLVR RCFAMEGNAM 600 QFSRKIACQF NGCKEKQIPE TEVIDASRNG EPTCKRIVIT LWSPLTVVLG SISTDLDSLE 660 STKRTYREGH IKCD |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 3.0e-7 | 23 | 155 | 145 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam11721 | Malectin | 5.0e-14 | 193 | 354 | 179 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 5.0e-65 | 26 | 357 | 353 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 7.0e-102 | 19 | 551 | 544 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hq1_A | 0.0000001 | 371 | 496 | 29 | 145 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 4hq1_A | 0.0005 | 424 | 502 | 208 | 295 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
| PDB | 3rj0_A | 0.00005 | 409 | 481 | 646 | 719 | A Chain A, The Structure Of A Protein In Glycosyl Transferase Family 8 From Anaerococcus Prevotii. |
