| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29739.m003671 |
| Family | CE8 |
| Protein Properties | Length: 541 Molecular Weight: 59192.1 Isoelectric Point: 9.2456 |
| Chromosome | Chromosome/Scaffold: 29739 Start: 663696 End: 665807 |
| Description | pectin methylesterase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 273 | 361 | 2.5e-29 |
| NVVVAADGSGNYRTVSEAVAAAPSRSSTRYVIRIKAGVYRENVDIPSSKTNLMFVGDGSTTTIITGSRSVVGGSTTFNSATVGVLGKRH | |||
| CE8 | 380 | 526 | 0 |
| FIFGNAAVVLQNCDLHARRPNPSQKNMVTAQGRDDPNQNTGIVIQKCRIGATQDLEAVKDSFQSYLGRPWKLYSRTVVMQTQISDIINPAGWFEWDGNFA LDTLTYREYQNTGPGANTANRVTWKGYKVMTSASEALPYTAENFISG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 541 Download |
| MANSSNDITT TKNKNKIKRR LFLSLFASVL LVAAIVGVVA GLASRRSAAN TVNNVHEAAH 60 AVVKSSCSST LYPDLCFSEI SALPVDVTSK IKSTKDVIHL SLNVTESSIG QTYQKIKTLT 120 FSRRGYSKRE NTAFKDCLEM LTEAVNEIRN VVQVLKEYPS LKKAISEHAD ELKILVSAAM 180 TNLESCLDGF SHSKADKEVR QFFLSDERHG HRLCSNALAM IKNMTDTDMA KEQELTSSSA 240 AERKLKEENG IEWPGWLSAG DRRLLQATTV TPNVVVAADG SGNYRTVSEA VAAAPSRSST 300 RYVIRIKAGV YRENVDIPSS KTNLMFVGDG STTTIITGSR SVVGGSTTFN SATVGVLGKR 360 HYLSKQCWTI NGTSCCIAHF IFGNAAVVLQ NCDLHARRPN PSQKNMVTAQ GRDDPNQNTG 420 IVIQKCRIGA TQDLEAVKDS FQSYLGRPWK LYSRTVVMQT QISDIINPAG WFEWDGNFAL 480 DTLTYREYQN TGPGANTANR VTWKGYKVMT SASEALPYTA ENFISGANWL PATGFPYSLG 540 L |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02933 | PLN02933 | 2.0e-106 | 87 | 541 | 513 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 4.0e-111 | 66 | 541 | 523 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 3.0e-120 | 65 | 541 | 523 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 4.0e-132 | 279 | 526 | 293 | + Pectinesterase. | ||
| PLN02313 | PLN02313 | 0 | 64 | 541 | 532 | + Pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO85706.1 | 0 | 52 | 541 | 51 | 579 | pectin methyl-esterase [Nicotiana benthamiana] |
| EMBL | CAB95025.1 | 0 | 52 | 541 | 51 | 579 | pectin methylesterase [Nicotiana tabacum] |
| RefSeq | XP_002324773.1 | 0 | 53 | 541 | 47 | 573 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516186.1 | 0 | 45 | 541 | 50 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| RefSeq | XP_002516188.1 | 0 | 1 | 541 | 1 | 541 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 266 | 541 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 270 | 541 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt9_B | 0.002 | 352 | 531 | 154 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2nt9_A | 0.002 | 352 | 531 | 154 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
