| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29739.m003697 |
| Family | CE8 |
| Protein Properties | Length: 378 Molecular Weight: 42017 Isoelectric Point: 9.3507 |
| Chromosome | Chromosome/Scaffold: 29739 Start: 848679 End: 850379 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 86 | 367 | 0 |
| RDDQFADFQSISDAIDSIPINNKQRRIIWIKGGEYFEKITINTSKPFITLYGDPGDMPKIVFNGTAARYGTVYSATVAVESKYFMAVNIAFVNSAPMPDV NKTGAQAVAMRISGDKAAFHNCKFVGFQDTLCDDRGRHVFRDCYIVGTVDFIFGNGKSLYLNTTIETVAQGTGVITAQARESVTDSSEFTFIHCNLTGIG NNTYLGRAWKERPRVVFAYAYMGSLINAAGWSTGKHPESNETVYYGEYKCKGPGAFSSGRVKYAKLLSDEEAKPFLSMTCIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 378 Download |
| MKRLFFSFTS PCLIAFILGL QLLPAANSHS KQVPKDISKL KTWVADNINQ FNNRKSDLSE 60 RIPRIILNKR LADAESSVRV ITVAKRDDQF ADFQSISDAI DSIPINNKQR RIIWIKGGEY 120 FEKITINTSK PFITLYGDPG DMPKIVFNGT AARYGTVYSA TVAVESKYFM AVNIAFVNSA 180 PMPDVNKTGA QAVAMRISGD KAAFHNCKFV GFQDTLCDDR GRHVFRDCYI VGTVDFIFGN 240 GKSLYLNTTI ETVAQGTGVI TAQARESVTD SSEFTFIHCN LTGIGNNTYL GRAWKERPRV 300 VFAYAYMGSL INAAGWSTGK HPESNETVYY GEYKCKGPGA FSSGRVKYAK LLSDEEAKPF 360 LSMTCINGNK WLIPPPEF |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02634 | PLN02634 | 5.0e-84 | 76 | 374 | 307 | + probable pectinesterase |
| PLN02432 | PLN02432 | 3.0e-89 | 92 | 372 | 282 | + putative pectinesterase |
| PLN02304 | PLN02304 | 4.0e-93 | 92 | 374 | 292 | + probable pectinesterase |
| PLN02682 | PLN02682 | 8.0e-108 | 79 | 374 | 303 | + pectinesterase family protein |
| PLN02665 | PLN02665 | 0 | 3 | 378 | 377 | + pectinesterase family protein |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27759.1 | 0 | 22 | 378 | 37 | 390 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI38547.1 | 0 | 14 | 376 | 8 | 363 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277518.1 | 0 | 22 | 378 | 25 | 378 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326144.1 | 0 | 1 | 378 | 1 | 374 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516214.1 | 0 | 1 | 378 | 1 | 378 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 9.99967e-42 | 88 | 372 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 3.00004e-41 | 75 | 372 | 1 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 4e-18 | 80 | 360 | 34 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 5e-17 | 83 | 247 | 8 | 187 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 5e-17 | 83 | 247 | 8 | 187 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
