y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29739.m003720 |
Family | GH35 |
Protein Properties | Length: 825 Molecular Weight: 91516.9 Isoelectric Point: 4.9923 |
Chromosome | Chromosome/Scaffold: 29739 Start: 1011952 End: 1015848 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 334 | 0 |
TIDGKRRVLLSGSIHYPRSTPQMWPDLIKKSKEGGLDAIETYVFWNVHEPSRRQYDFGGNLDLVRFIKAVQDEGLYAVLRIGPYVCAEWNYGGFPVWLHN MPGIELRTANSIFMNEMQNFTSLIVDMMKQEQLFASQGGPIIIAQVENEYGNVMSSYGAAGKAYIDWCANMAESLNIGVPWIMCQQSDAPDPMINTCNGW YCDQFTPSNPNSPKMWTENWTGWFKSWGGKDPHRTAEDVAFAVARFFQTGGTFQNYYMYHGGTNFGRTAGGPYITTSYDYDAPLDEFGNLNQPKWGHLKQ LH |
Full Sequence |
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Protein Sequence Length: 825 Download |
MASLKFLLAI SFSLFTFHLV SAAVISHDGR AITIDGKRRV LLSGSIHYPR STPQMWPDLI 60 KKSKEGGLDA IETYVFWNVH EPSRRQYDFG GNLDLVRFIK AVQDEGLYAV LRIGPYVCAE 120 WNYGGFPVWL HNMPGIELRT ANSIFMNEMQ NFTSLIVDMM KQEQLFASQG GPIIIAQVEN 180 EYGNVMSSYG AAGKAYIDWC ANMAESLNIG VPWIMCQQSD APDPMINTCN GWYCDQFTPS 240 NPNSPKMWTE NWTGWFKSWG GKDPHRTAED VAFAVARFFQ TGGTFQNYYM YHGGTNFGRT 300 AGGPYITTSY DYDAPLDEFG NLNQPKWGHL KQLHDVLHSM EEILTSGTVS SVDYDNSVTA 360 TIYATDKESS CFLSNANETS DATIEFKGTT YTIPAWSVSI LPDCANVGYN TAKVKTQTSV 420 MVKRDNKAED EPTSLNWSWR PENVDKTVLL GQGHIHAKQI VDQKAVANDA SDYLWYMTSV 480 DLKKDDLIWS KDMSIRINGS GHILHAYVNG EYLGSQWSEY SVSNYVFEKS VKLKHGRNLI 540 TLLSATVGLA NYGANYDLIQ AGILGPVELV GRKGDETIIK DLSNNRWSYK VGLLGLEDKL 600 YLSDSKHASK WQEQELPTNK MLTWYKTTFK APLGTDPVVL DLQGLGKGMA WINGNSIGRY 660 WPSFLAEDDG CSTDLCDYRG PYDNNKCVSN CGKPTQRWYH VPRSFLQDNE NTLVLFEEFG 720 GNPSQVNFQT VVTGVACVSG DEGEVVEISC NGQSISAVQF ASFGDPQGTC GSSVKGSCEG 780 TEDALLIVQK ACVGNESCSL EVSHKLFGST SCDNGVNRLA VEVLC 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-6 | 47 | 202 | 173 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 3.0e-14 | 748 | 825 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 4.0e-24 | 25 | 327 | 368 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-166 | 31 | 334 | 319 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 6 | 825 | 847 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 7 | 825 | 7 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 9 | 825 | 21 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 1 | 825 | 1 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 1 | 825 | 1 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 1 | 825 | 25 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 34 | 333 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3.00004e-41 | 35 | 343 | 21 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3.00004e-41 | 35 | 343 | 21 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |