Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29739.m003740 |
Family | GH35 |
Protein Properties | Length: 848 Molecular Weight: 94190.9 Isoelectric Point: 6.2562 |
Chromosome | Chromosome/Scaffold: 29739 Start: 1105525 End: 1109478 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 55 | 356 | 0 |
TIDGKRRVLISGSIHYPRSTAEMWPDLIKKSKEGGLDAIETYVFWNSHEPSRRQYDFSGNLDLVRFIKTIQAEGLYAVLRIGPYVCAEWNYGGFPMWLHN LPGCELRTANSVFMNEMQNFTSLIVDMMKDENLFASQGGPIILAQVENEYGNVMSAYGAAGKTYIDWCSNMAESLDIGVPWIMCQQSDAPQPMINTCNGW YCDQFTPNNANSPKMWTENWTGWFKSWGGKDPHRTAEDVAFAVARFFQTGGTFQNYYMYHGGTNFGRTAGGPYITTSYDYDAPLDEYGNLNQPKWGHLKQ LH |
Full Sequence |
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Protein Sequence Length: 848 Download |
MSHMFSYKYS VPVLFNTILC SFNRMASSKS VVAIFFCLFT FVSATIVSHD GRAITIDGKR 60 RVLISGSIHY PRSTAEMWPD LIKKSKEGGL DAIETYVFWN SHEPSRRQYD FSGNLDLVRF 120 IKTIQAEGLY AVLRIGPYVC AEWNYGGFPM WLHNLPGCEL RTANSVFMNE MQNFTSLIVD 180 MMKDENLFAS QGGPIILAQV ENEYGNVMSA YGAAGKTYID WCSNMAESLD IGVPWIMCQQ 240 SDAPQPMINT CNGWYCDQFT PNNANSPKMW TENWTGWFKS WGGKDPHRTA EDVAFAVARF 300 FQTGGTFQNY YMYHGGTNFG RTAGGPYITT SYDYDAPLDE YGNLNQPKWG HLKQLHDILH 360 SMEYTLTHGN ISTIDYDNSV TATIYATDKE SACFFGNANE TSDATIVFKG TEYNVPAWSV 420 SILPDCENVG YNTAKVKTQT AIMVKQKNEA EDQPSSLKWS WIPENTHTTS LLGKGHAHAR 480 QLIDQKAAAN DASDYLWYMT SLHIKKDDPV WSSDMSLRVN GSGHVLHAYV NGKHLGSQFA 540 KYGVFSYVFE KSLKLRPGKN VISLLSATVG LQNYGPMFDL VQTGIPGPVE IIGHRGDEKV 600 VKDLSSHKWS YSVGLNGFHN ELYSSNSRHA SRWVEQDLPT NKMMIWYKTT FKAPLGKDPV 660 VLDLQGMGKG FAWVNGNNIG RYWPSFLAEE DGCSTEVCDY RGAYDNNKCV TNCGKPTQRW 720 YHVPRSFFND YENTLVLFEE FGGNPAGVNF QTVTVGKVSG SAGEGETIEL SCNGKSISAI 780 EFASFGDPQG TSGAYVKGTC EGSNDAFSIV QKACVGKETC KLEASKDVFG PTSCGSDVVN 840 TLAVQATC |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 2.0e-5 | 69 | 152 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 7.0e-15 | 770 | 848 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 1.0e-23 | 47 | 349 | 368 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 6.0e-162 | 53 | 356 | 319 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 25 | 848 | 855 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 33 | 848 | 5 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 9 | 848 | 2 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 25 | 848 | 1 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 25 | 848 | 1 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 1 | 848 | 1 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 56 | 355 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1e-39 | 57 | 346 | 21 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1e-39 | 57 | 346 | 21 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |