Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29748.m000380 |
Family | CE8 |
Protein Properties | Length: 350 Molecular Weight: 38961.4 Isoelectric Point: 9.3082 |
Chromosome | Chromosome/Scaffold: 29748 Start: 54687 End: 56200 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 58 | 342 | 0 |
KVDINGKGDFTSIQEAINAVPQNNSKWIIIHVRKGVYREKVHIPKNKPYIFLRGNGKGRTALVWSLSSTDNKASATFTVEAPHFIAFGISIKNEAPTGVA FTSQNQSVAAFVGADMVAFYHCAFYSTHNTLFDYKGRHYYDHCYIQGSIDFIFGRARSIFHSCELFVIADLRVKIHGSITAHNRESHDDSGFVFVKGKVY GIGDVYLGRAKGAYSRTIFAKTYLSRTIDPRGWTNWSYSGTTENLFQAEYKCHGPGADTTDRVEWAKQLTEAEAEPFMSIDFIDG |
Full Sequence |
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Protein Sequence Length: 350 Download |
MLRMPLSSVS PLVLFLKAAI LAAVVAISFS GNAYALSAQT VIDSPLLTQK IGTNRTIKVD 60 INGKGDFTSI QEAINAVPQN NSKWIIIHVR KGVYREKVHI PKNKPYIFLR GNGKGRTALV 120 WSLSSTDNKA SATFTVEAPH FIAFGISIKN EAPTGVAFTS QNQSVAAFVG ADMVAFYHCA 180 FYSTHNTLFD YKGRHYYDHC YIQGSIDFIF GRARSIFHSC ELFVIADLRV KIHGSITAHN 240 RESHDDSGFV FVKGKVYGIG DVYLGRAKGA YSRTIFAKTY LSRTIDPRGW TNWSYSGTTE 300 NLFQAEYKCH GPGADTTDRV EWAKQLTEAE AEPFMSIDFI DGQQWLPVWL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 4.0e-83 | 29 | 346 | 329 | + pectinesterase family protein | ||
PLN02497 | PLN02497 | 3.0e-89 | 55 | 346 | 300 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-93 | 57 | 346 | 291 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 8.0e-101 | 55 | 347 | 304 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 0 | 27 | 350 | 324 | + Probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5.60519e-45 | 51 | 346 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8.99998e-41 | 62 | 346 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.000000000000004 | 67 | 348 | 18 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.000000000000004 | 67 | 348 | 18 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.000000000000004 | 67 | 348 | 18 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |