Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29748.m000381 |
Family | AA3 |
Protein Properties | Length: 243 Molecular Weight: 26750 Isoelectric Point: 6.2709 |
Chromosome | Chromosome/Scaffold: 29748 Start: 57310 End: 59065 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 21 | 198 | 2.6e-25 |
SEDYYDYIIVGGGTAGCPLAATLSQSYRVLLLERGGVPYSKPNVMTQEGFLATLTEVNTFDSPAQSFTSEDGVPNARGRILGGSSAINAGFYSRADTDFF RQSGVNWDMRVVNQSYDWIEKAIVFRPELRNWQSAVRDGLLEAGVDPYNGFSLDHLMGTKISGSTFDGSGRRHSSADL |
Full Sequence |
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Protein Sequence Length: 243 Download |
MNVYTDPSYQ QFVVNATDLP SEDYYDYIIV GGGTAGCPLA ATLSQSYRVL LLERGGVPYS 60 KPNVMTQEGF LATLTEVNTF DSPAQSFTSE DGVPNARGRI LGGSSAINAG FYSRADTDFF 120 RQSGVNWDMR VVNQSYDWIE KAIVFRPELR NWQSAVRDGL LEAGVDPYNG FSLDHLMGTK 180 ISGSTFDGSG RRHSSADLLN YANARNIKVA VHAISPGTNP QATVMMLGRY IGLKIINERM 240 KYK |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02785 | PLN02785 | 2.0e-9 | 215 | 240 | 26 | + Protein HOTHEAD | ||
TIGR03970 | Rv0697 | 1.0e-11 | 26 | 145 | 129 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
PRK02106 | PRK02106 | 1.0e-11 | 25 | 114 | 97 | + choline dehydrogenase; Validated | ||
COG2303 | BetA | 7.0e-13 | 25 | 119 | 102 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 7.0e-87 | 8 | 213 | 206 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002277531.1 | 0 | 7 | 213 | 32 | 238 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002277531.1 | 0.000003 | 175 | 241 | 488 | 548 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311915.1 | 0 | 6 | 213 | 1 | 208 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002311915.1 | 0.00002 | 198 | 239 | 476 | 517 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523017.1 | 0 | 1 | 243 | 1 | 243 | mandelonitrile lyase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 6 | 213 | 8 | 215 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3gdp_A | 0 | 6 | 213 | 8 | 215 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3gdn_B | 0 | 6 | 213 | 8 | 215 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY277301 | 235 | 6 | 240 | 0 |
FC898498 | 200 | 6 | 205 | 0 |
EX668479 | 208 | 6 | 213 | 0 |
JG640167 | 207 | 7 | 213 | 0 |
GO953296 | 197 | 7 | 203 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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