| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29749.m000140 |
| Family | GH33 |
| Protein Properties | Length: 321 Molecular Weight: 36069.2 Isoelectric Point: 4.9535 |
| Chromosome | Chromosome/Scaffold: 29749 Start: 10654 End: 13748 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH33 | 17 | 311 | 2.8e-28 |
| FPEKSAPFDNCHASTIVEVDKDHFLVAYFGGTLEGAPDVKIWLQTYKDGFWQSPVIVDEQPEVPMWNPVLFKLSSEELLLFYKIGQEVQKWSGCMKRSYD KGVTWTAREQLPPGILGPSKNKPILLENGLLLCGSSVESWNSWGAWMEVTADAGRSWKKYGPIYIVNTSLSVIQPVLFQTAKGTLRVLLRSFDGIGKICM SESLDGGLNWGYAKLTELPNPNSGIDGVKLKDGRLLLAYNTISRGVLKVAISEDDGDSWYDVITLEENLEMEFSYPAVIQASDGSVHISYTYNRT | |||
| Full Sequence |
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| Protein Sequence Length: 321 Download |
| MRKDCYIRGP LKEEFTFPEK SAPFDNCHAS TIVEVDKDHF LVAYFGGTLE GAPDVKIWLQ 60 TYKDGFWQSP VIVDEQPEVP MWNPVLFKLS SEELLLFYKI GQEVQKWSGC MKRSYDKGVT 120 WTAREQLPPG ILGPSKNKPI LLENGLLLCG SSVESWNSWG AWMEVTADAG RSWKKYGPIY 180 IVNTSLSVIQ PVLFQTAKGT LRVLLRSFDG IGKICMSESL DGGLNWGYAK LTELPNPNSG 240 IDGVKLKDGR LLLAYNTISR GVLKVAISED DGDSWYDVIT LEENLEMEFS YPAVIQASDG 300 SVHISYTYNR TQIKYVVLQP N |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 0.009 | 111 | 279 | 199 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 2.0e-25 | 18 | 320 | 355 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 8.0e-84 | 38 | 304 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61202.1 | 0 | 11 | 319 | 9 | 317 | unknown [Arabidopsis thaliana] |
| GenBank | ACU18568.1 | 0 | 1 | 321 | 34 | 354 | unknown [Glycine max] |
| RefSeq | XP_002263578.1 | 0 | 4 | 321 | 52 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324495.1 | 0 | 1 | 321 | 1 | 321 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531744.1 | 0 | 1 | 321 | 1 | 321 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EE258658 | 239 | 1 | 239 | 0 |
| DV137355 | 268 | 40 | 307 | 0 |
| EL689016 | 285 | 21 | 305 | 0 |
| DV145816 | 255 | 37 | 291 | 0 |
| CV274814 | 246 | 75 | 320 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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