| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29751.m001796 |
| Family | GT35 |
| Protein Properties | Length: 849 Molecular Weight: 96316.6 Isoelectric Point: 6.7218 |
| Chromosome | Chromosome/Scaffold: 29751 Start: 47321 End: 55183 |
| Description | alpha-glucan phosphorylase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT35 | 122 | 844 | 0 |
| ALNKLGHELEEIVEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQRITKEGQEELAEDWLEKFSPWEVVRHDIVFPVRFFGQVQVNP DGFRKWVGGEIVQALAYDVPIPGYKTKNTISLRLWEAKACAEDFNLFQFNDGKYESAAQLHSRAQQICAVLYPGDATEDGKLLRLKQQFFLCSASLQDII LRFKERRTGKGPWEWSDFPSKIAVQLNDTHPTLAIPELMRLLMDDEGLGWDEAWNVTTRTIAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEADKRFI AMIRSSRIDLESKLPSMCILDNNPQKPVVRMANLCVVSSHTVNGVAQLHSDILKSELFSDYVSLWPKKFQNKTNGITPRRWLRFCSPELSNIITKCLKTD HWVTNLDLLVGLREVAENSDFQAQWDAAKMANKQRLAQYILKVTGVSIDPNSLFDIQVKRIHEYKRQLLNILGAVYRYKKLKEMSAEERKNTTPRTIMIG GKAFATYTNAKRIVKLVNDVGAVVNSDPEVNSYLKVVFVPNYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFALNGCLIVGTLDGANVEIREEIGEE NFFLFGATADEVPRLRKERENGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLESLEGNSGYGRGDYFLVGQDFPSYLDAQDRVDEAYKDRKRWLKMSILST AGSGKFSSDRTIAQYANEIWNIK | |||
| Full Sequence |
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| Protein Sequence Length: 849 Download |
| MATTSIETNG TSCITVSAIH SSKIPPTANP LASDPSEIAS NINYHAQYSP HFSPFKFEPE 60 QAYYATAESV RDRLIQQWND TYLHYHKVDP KQTYYLSMEY LQGRALTNAI GNLDIRGAYA 120 NALNKLGHEL EEIVEQEKDA ALGNGGLGRL ASCFLDSMAT LNLPAWGYGL RYRYGLFKQR 180 ITKEGQEELA EDWLEKFSPW EVVRHDIVFP VRFFGQVQVN PDGFRKWVGG EIVQALAYDV 240 PIPGYKTKNT ISLRLWEAKA CAEDFNLFQF NDGKYESAAQ LHSRAQQICA VLYPGDATED 300 GKLLRLKQQF FLCSASLQDI ILRFKERRTG KGPWEWSDFP SKIAVQLNDT HPTLAIPELM 360 RLLMDDEGLG WDEAWNVTTR TIAYTNHTVL PEALEKWSQA VMWKLLPRHM EIIEEADKRF 420 IAMIRSSRID LESKLPSMCI LDNNPQKPVV RMANLCVVSS HTVNGVAQLH SDILKSELFS 480 DYVSLWPKKF QNKTNGITPR RWLRFCSPEL SNIITKCLKT DHWVTNLDLL VGLREVAENS 540 DFQAQWDAAK MANKQRLAQY ILKVTGVSID PNSLFDIQVK RIHEYKRQLL NILGAVYRYK 600 KLKEMSAEER KNTTPRTIMI GGKAFATYTN AKRIVKLVND VGAVVNSDPE VNSYLKVVFV 660 PNYNVSVAEM LIPGSELSQH ISTAGMEASG TSNMKFALNG CLIVGTLDGA NVEIREEIGE 720 ENFFLFGATA DEVPRLRKER ENGLFKPDPR FEEAKQFIRS GAFGSYDYNP LLESLEGNSG 780 YGRGDYFLVG QDFPSYLDAQ DRVDEAYKDR KRWLKMSILS TAGSGKFSSD RTIAQYANEI 840 WNIKECRVP 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd04300 | GT1_Glycogen_Phosphorylase | 0 | 39 | 843 | 813 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
| TIGR02093 | P_ylase | 0 | 42 | 843 | 810 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam00343 | Phosphorylase | 0 | 122 | 845 | 729 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
| PRK14985 | PRK14985 | 0 | 95 | 844 | 755 | + maltodextrin phosphorylase; Provisional | ||
| COG0058 | GlgP | 0 | 34 | 844 | 815 | + Glucan phosphorylase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004645 | phosphorylase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2gj4_A | 0 | 36 | 847 | 14 | 820 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
| PDB | 4el5_A | 0 | 36 | 847 | 14 | 820 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
| PDB | 4el0_A | 0 | 36 | 847 | 14 | 820 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
| PDB | 4eky_A | 0 | 36 | 847 | 14 | 820 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
| PDB | 4eke_A | 0 | 36 | 847 | 14 | 820 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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