| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29810.m000145 |
| Family | GH5 |
| Protein Properties | Length: 515 Molecular Weight: 57804.8 Isoelectric Point: 5.4115 |
| Chromosome | Chromosome/Scaffold: 29810 Start: 44858 End: 49300 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 192 | 477 | 1.4013e-45 |
| GHSKAKEILKKHRNTLITVEDFKFLFKHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNAFSWAQAYDIRCIIDLHAAPGSQNGMEHSASRDGTTGWP TSADYISQTLNVIDFLASRYARHPALLGIELLNEPSAASVPLEVLVPYYKQGYEIVRKYSPNAYVIICQRIGNADPLELYQANIGSHNIVVDLHYYNLFD TFFVNMSSEDNIQFIYKSREAQLQALNSANGPLIFIGEWVNEWNVTSGSQTDYQDFGKAQLEVYDAASFGWAYWTLKNDRKHWDFE | |||
| Full Sequence |
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| Protein Sequence Length: 515 Download |
| MLYCLIQVEG LREDSKVRGV NLGGWLVVEG WIKPSLFDGI PNGDMLDGTE VQLKSVISQK 60 YLSAENGGGM GVTVDRDAAS SWETFRLWRH SELEFQLHTS QGQFLTCDGE GCSISATANS 120 SSAGTTFFIE RNNNNRVHIK LNSGTYLQAS TGNQLRADYP GKPGWDDNAA TFEMTVIANN 180 LHGDYQLANG YGHSKAKEIL KKHRNTLITV EDFKFLFKHG INTVRIPVGW WIAFDPDPPA 240 PFIGGSLEAL DNAFSWAQAY DIRCIIDLHA APGSQNGMEH SASRDGTTGW PTSADYISQT 300 LNVIDFLASR YARHPALLGI ELLNEPSAAS VPLEVLVPYY KQGYEIVRKY SPNAYVIICQ 360 RIGNADPLEL YQANIGSHNI VVDLHYYNLF DTFFVNMSSE DNIQFIYKSR EAQLQALNSA 420 NGPLIFIGEW VNEWNVTSGS QTDYQDFGKA QLEVYDAASF GWAYWTLKND RKHWDFEWNI 480 RNRYLQFGNS PAKEIFNRVA LLGLVSTCFF LHHLI |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 1.0e-8 | 51 | 158 | 108 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 2.0e-20 | 205 | 470 | 270 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 1.0e-24 | 180 | 488 | 344 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI33153.1 | 0 | 8 | 515 | 83 | 592 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002262875.1 | 0 | 8 | 515 | 71 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310872.1 | 0 | 17 | 488 | 1 | 474 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002438060.1 | 0 | 1 | 504 | 17 | 528 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
| RefSeq | XP_002533566.1 | 0 | 1 | 515 | 1 | 515 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3n9k_A | 7e-30 | 184 | 477 | 50 | 375 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 3n9k_A | 0.005 | 13 | 51 | 10 | 48 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 1eqp_A | 2e-29 | 184 | 477 | 45 | 370 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqp_A | 0.005 | 13 | 51 | 5 | 43 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 2pc8_A | 3e-29 | 184 | 477 | 51 | 376 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CO087274 | 296 | 111 | 406 | 0 |
| JG854517 | 250 | 196 | 445 | 0 |
| CO114350 | 237 | 143 | 379 | 0 |
| EX167089 | 260 | 209 | 468 | 0 |
| EY770527 | 248 | 72 | 319 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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