| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29812.m000194 |
| Family | GH10 |
| Protein Properties | Length: 318 Molecular Weight: 36007.7 Isoelectric Point: 6.2415 |
| Chromosome | Chromosome/Scaffold: 29812 Start: 13325 End: 14526 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 1 | 227 | 0 |
| MKWYSTEQTYGNVDYSIPDAMIQFAKQNNISVRGHNVFWDDPKYQPGWLNSLSPSDFKRASMRRLKSIMLRYKGKVIAWDVVNENMHFSFFESKLGQNAS AVLYKMAQKVDGNATLFLNEFNTIEDSRDDASSRTKYLKTLKEIKGYPGNENLKLGIGLESHFNTPNLPYMRASIDILAAANLPIWLTEVDVESSPNQAQ YLEEVLREAHGHPKVTGIILWSAWKPE | |||
| Full Sequence |
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| Protein Sequence Length: 318 Download |
| MKWYSTEQTY GNVDYSIPDA MIQFAKQNNI SVRGHNVFWD DPKYQPGWLN SLSPSDFKRA 60 SMRRLKSIML RYKGKVIAWD VVNENMHFSF FESKLGQNAS AVLYKMAQKV DGNATLFLNE 120 FNTIEDSRDD ASSRTKYLKT LKEIKGYPGN ENLKLGIGLE SHFNTPNLPY MRASIDILAA 180 ANLPIWLTEV DVESSPNQAQ YLEEVLREAH GHPKVTGIIL WSAWKPEGCY RMCLTDHNFK 240 NLPTGDVVDK LMGEWFGIES SSGMADANGF FEISLSHGEY LVKIHHQASN SSFDQMIVLA 300 SSDDKKLPCD NASSSFNM |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 2.0e-30 | 1 | 243 | 275 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 6.0e-45 | 1 | 221 | 240 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 4.0e-78 | 1 | 248 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN10199.1 | 0 | 1 | 305 | 265 | 573 | endoxylanase [Carica papaya] |
| DDBJ | BAH92032.1 | 0 | 1 | 307 | 101 | 408 | Os03g0201901 [Oryza sativa Japonica Group] |
| RefSeq | XP_002313180.1 | 0 | 1 | 288 | 228 | 514 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532417.1 | 0 | 1 | 318 | 1 | 318 | Endo-1,4-beta-xylanase precursor, putative [Ricinus communis] |
| RefSeq | XP_002532418.1 | 0 | 1 | 307 | 256 | 562 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 2e-24 | 1 | 248 | 46 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1tux_A | 5e-24 | 1 | 252 | 49 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1x_A | 1e-22 | 1 | 243 | 49 | 292 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1w_A | 1e-22 | 1 | 243 | 49 | 292 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1gor_A | 2e-22 | 1 | 243 | 49 | 292 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX266128 | 265 | 1 | 263 | 0 |
| FL788487 | 247 | 34 | 280 | 0 |
| GR187811 | 252 | 37 | 286 | 0 |
| GR186303 | 255 | 11 | 263 | 0 |
| FL854687 | 244 | 57 | 299 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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