| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29812.m000199 |
| Family | GH10 |
| Protein Properties | Length: 564 Molecular Weight: 64406.4 Isoelectric Point: 7.4546 |
| Chromosome | Chromosome/Scaffold: 29812 Start: 40247 End: 42675 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH10 | 213 | 473 | 0 |
| TRPHFPFGCGMNHYILTSEAYRKWFSSRFKFTTFTNEMKWYSIEAIKGLENYTVADAMLRFAKENGISVRGHNILWDNPEHQPRWVQKLPPKKLRRAAMK RVNSVARRYSGQLIAWDVMNENLHFRFYEQNLGENASAEFHARTYHFDPHTRMFMNEYNTIECSEDEAANPVQYIKKLEEILSYPSNKDMLVGIGLQGHF TSGQPNLVYMRSALDILGSTKLPIWLTEVDVDEGHNQANYFEQILREGYSHPAVKGIIIFG | |||
| Full Sequence |
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| Protein Sequence Length: 564 Download |
| MTPVPCLELS LSPRIILQQE RKCLVKPRRP PYGGGIIVNP EFRNSIEGWK VFGKGEMKRG 60 ISEDGNNFAV AYNRSGPLDS ISQKVQLEKG KLYSFSAWVQ ISEGSETVAT VFRAVNSEWI 120 HGGYIIAKHG CWSLLKGGMV ANVSGLVEIL FECKNTIVDI WIDNVSLQPF TMEEWRSHQD 180 KIIEKVRKTK VKLQATYANQ TVFEGAVVSI KQTRPHFPFG CGMNHYILTS EAYRKWFSSR 240 FKFTTFTNEM KWYSIEAIKG LENYTVADAM LRFAKENGIS VRGHNILWDN PEHQPRWVQK 300 LPPKKLRRAA MKRVNSVARR YSGQLIAWDV MNENLHFRFY EQNLGENASA EFHARTYHFD 360 PHTRMFMNEY NTIECSEDEA ANPVQYIKKL EEILSYPSNK DMLVGIGLQG HFTSGQPNLV 420 YMRSALDILG STKLPIWLTE VDVDEGHNQA NYFEQILREG YSHPAVKGII IFGGPRIAGF 480 NVTTLGDEDF KNTPAGDVVD KLIEEWKTGN LELVTDSKGF AEVSLFHGDY ELTVKHPRSN 540 FSTTLSYKVE EEKFQETINL NIID |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 0.0006 | 34 | 108 | 80 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 8.0e-29 | 229 | 473 | 266 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 8.0e-45 | 209 | 499 | 319 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 5.0e-72 | 250 | 499 | 274 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002313181.1 | 0 | 22 | 562 | 33 | 573 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313182.1 | 0 | 22 | 549 | 4 | 531 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313183.1 | 0 | 57 | 564 | 1 | 508 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532419.1 | 0 | 23 | 552 | 8 | 537 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002532422.1 | 0 | 1 | 564 | 1 | 564 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1tux_A | 2e-20 | 219 | 503 | 18 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1x_A | 5e-20 | 206 | 505 | 5 | 303 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1w_A | 5e-20 | 206 | 505 | 5 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1nq6_A | 6e-20 | 219 | 499 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2bnj_A | 1e-19 | 206 | 505 | 5 | 303 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| ES830806 | 290 | 99 | 386 | 0 |
| DV141191 | 250 | 208 | 457 | 0 |
| CV887102 | 265 | 300 | 564 | 0 |
| DV134092 | 255 | 49 | 303 | 0 |
| EX529522 | 282 | 22 | 301 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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