Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29815.m000493 |
Family | GH35 |
Protein Properties | Length: 822 Molecular Weight: 92515.2 Isoelectric Point: 6.8312 |
Chromosome | Chromosome/Scaffold: 29815 Start: 33976 End: 38431 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 16 | 317 | 0 |
IDGARKLILSGSIHYPRSTPEMWPQLIRKAKEGGLNTIETYVFWNAHEPHQRQYDFSGNLDLIRFIKTIRDEGLYAILRIGPYVCAEWNYGGFPVWLHNL PGIQIRTNNEVYKNEMEIFTTLIVNMMKDGKLFASQGGPIILSQIENEYGNVQSSYGDEGKEYVKWCANLAESFKVGVPWIMCQQSDAPSPMIDSCNGFY CDQYYSNNKSLPKIWTENWTGWFQDWGQKNPHRSAEDVAFAVARFFQLGGSVMNYYMYHGGTNFGTTGGGPYITASYDYDAPLDEYGNLRQPKWGHLRDL HS |
Full Sequence |
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Protein Sequence Length: 822 Download |
MGFGYEVTYD NRAIKIDGAR KLILSGSIHY PRSTPEMWPQ LIRKAKEGGL NTIETYVFWN 60 AHEPHQRQYD FSGNLDLIRF IKTIRDEGLY AILRIGPYVC AEWNYGGFPV WLHNLPGIQI 120 RTNNEVYKNE MEIFTTLIVN MMKDGKLFAS QGGPIILSQI ENEYGNVQSS YGDEGKEYVK 180 WCANLAESFK VGVPWIMCQQ SDAPSPMIDS CNGFYCDQYY SNNKSLPKIW TENWTGWFQD 240 WGQKNPHRSA EDVAFAVARF FQLGGSVMNY YMYHGGTNFG TTGGGPYITA SYDYDAPLDE 300 YGNLRQPKWG HLRDLHSVLN SMEQTLTYGE SKNSNYPDNN NIFITIFAYQ GKRSCFFSSI 360 DYKDQTISFE GTDYFLPAWS VSILPDCFTE VYNTATVNVQ TSIMENKANA ADSFREPNSL 420 QWKWRPEKIR GLSLQGDFVG NTLVANELMD QKAVTNGTSD YLWIMTNYDH NMNDSLWGAG 480 KDIILQVHTN GHVVHAFVNG KHVGSQSASI ESGRFDFVFE SKIKLKRGIN RISLVSVSVG 540 LQNYGANFDT APTGINGPIT IIGRSKLGNQ PDVTVDISSN RWVYKTGLHG EDQGFQAVRP 600 RHRRQFYTKH VLINQPFVWY KTSFNAPLGQ DPVVVDLLGL GKGTAWVNGR NIGRFWPKAL 660 APDDGTCNAP CSYIGTYEPK QCVTGCGEPT QRYYHIPRDW LKPEDNKLVL FEELGGTPDF 720 VSVQTVTVGK VCVHGYEGHT VELSCQHGRK FSKITFASFG LPQGKCGSFT PSNNHDCHAD 780 VSTIVEKACV GKERCSIDIS EKALAPIHCD ARIYRLAVEA VC |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 5.0e-8 | 29 | 184 | 176 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 2.0e-10 | 743 | 822 | 83 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 6.0e-24 | 7 | 189 | 194 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 7.0e-150 | 16 | 317 | 317 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 7 | 822 | 840 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 1 | 822 | 19 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 6 | 822 | 39 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002516237.1 | 0 | 7 | 822 | 25 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 7 | 822 | 47 | 848 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002528629.1 | 0 | 1 | 822 | 1 | 822 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 16 | 315 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 8.99634e-43 | 5 | 315 | 9 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 8.99634e-43 | 5 | 315 | 9 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 726 | 6 | 728 | 0 |
HO780602 | 629 | 57 | 682 | 0 |
DW076707 | 310 | 7 | 316 | 0 |
HO795552 | 544 | 97 | 637 | 0 |
HO780602 | 35 | 681 | 715 | 0.0006 |
Sequence Alignments (This image is cropped. Click for full image.) |
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