| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29815.m000507 |
| Family | GT30 |
| Protein Properties | Length: 446 Molecular Weight: 49761.1 Isoelectric Point: 9.0155 |
| Chromosome | Chromosome/Scaffold: 29815 Start: 140335 End: 147116 |
| Description | KDO transferase A |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT30 | 45 | 225 | 0 |
| RWPERFGWPSVPRPSGRLLWFHAVSLGEGMAAIPVIKRCVECRPDLSILMTTTTLSAFEVIKNQLPNGVLYQFSPLDTPAAVDNFLDYWKPNAIVILESE LWPNLIMGSSRKGILLALLNARVSMKSFRLWSQPVLLPLISLMLSKFSLIIPLSTLQAIHFQILQAPPAIINFSGDLKYAV | |||
| Full Sequence |
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| Protein Sequence Length: 446 Download |
| MDATAARNRG MLLYKIYRAF TYAVTPLVRL HMQWRRLLGL EHPNRWPERF GWPSVPRPSG 60 RLLWFHAVSL GEGMAAIPVI KRCVECRPDL SILMTTTTLS AFEVIKNQLP NGVLYQFSPL 120 DTPAAVDNFL DYWKPNAIVI LESELWPNLI MGSSRKGILL ALLNARVSMK SFRLWSQPVL 180 LPLISLMLSK FSLIIPLSTL QAIHFQILQA PPAIINFSGD LKYAVEYDAS NGETGSIDDL 240 KGELTHRQVW MAASIHRGEE QVVLEAHEAL IQKYPDLVTI IVPRYGQHGQ DIAQELQKEG 300 NIVALRSQRQ RIVPGTQFYV VDTIGELRHL YGLSPIAVIG GSFLPGLAGH NISEAAAAGC 360 AVLTGYHVGH FLHMVKEMQA LNPLSVMQVS GTLELQGAIM KLFGDPKVLE ARRMAAKQAF 420 CALSTDIISN VWNHLNFYIL ETVARK 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04413 | Glycos_transf_N | 3.0e-57 | 42 | 226 | 187 | + 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. | ||
| COG1519 | KdtA | 3.0e-103 | 17 | 439 | 426 | + 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK05749 | PRK05749 | 2.0e-110 | 12 | 417 | 408 | + 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016740 | transferase activity |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xcu_D | 1e-23 | 63 | 424 | 43 | 365 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 2xcu_C | 1e-23 | 63 | 424 | 43 | 365 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 2xcu_B | 1e-23 | 63 | 424 | 43 | 365 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 2xcu_A | 1e-23 | 63 | 424 | 43 | 365 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 2xci_D | 1e-23 | 63 | 424 | 43 | 365 | A Chain A, Membrane-Embedded Monofunctional Glycosyltransferase Waaa Of Aquifex Aeolicus, Substrate-Free Form |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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