| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29827.m002655 |
| Family | AA3 |
| Protein Properties | Length: 710 Molecular Weight: 79056.4 Isoelectric Point: 8.4175 |
| Chromosome | Chromosome/Scaffold: 29827 Start: 729689 End: 732428 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 202 | 704 | 0 |
| PLVIRCDAVVVGSGSGGSVVAGALAKAGYKVLVLEKGNYFARSNLSLLEGPTMDQMYLSGGLMATDDMGVVLLAGSTVGGGSTINWSASIKTPQHVISEW TNCYDLEIFGSKLYKEALDVVCEKMGVQSEIHVEGFNNEILRKGCEELGYPVSNIPRNSAPDHYCGWCCLGCKDGKKKGTCETWLLDLVNSGNGAILPRC EVIKILHKRKSNRKAATGVVFGFEYKGKKELYVVESKVTIIACGALSSPPLLRRSGLKNPNIGRNLHLHPVTMAWGYFPEAWPEVEKKSYEGGIMTAMST VVANFDKSGYGAVIQTPSLHPGMFSSLMPWVSGADIKMQMCRYSRTAHIFALGRDKGSGTVNSPSSITYQMKAADEKNLQNGIEKILRILAAAGAEEIGT HHCIGRRLNVKTASYHEFEKFVKEERARPMRDLSNQICSAHQMGSCRMGVNPKHSVVNQTGETWEIEGLYLADASVFPTALGVNPMVTVQAIAYCTAQSV LEV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 710 Download |
| MHICDWQLGG LISERLKHPK KWLIRLALWM LSTWIGTFIL CGVASISTHF PYFQSFSQLT 60 LHKREKILHS WSLSFLYPLR MLFKAMKLLI LLVFFSQVDE KNENLTWKAI GYPGPDPQFK 120 VDKWEALKLS PYARFTDKQL ERKEEEEEEE EEEEEGEDEL KLFGPLHRGI VDMNLPRDAV 180 ANSLQRLGFS ILANRPKKYY SPLVIRCDAV VVGSGSGGSV VAGALAKAGY KVLVLEKGNY 240 FARSNLSLLE GPTMDQMYLS GGLMATDDMG VVLLAGSTVG GGSTINWSAS IKTPQHVISE 300 WTNCYDLEIF GSKLYKEALD VVCEKMGVQS EIHVEGFNNE ILRKGCEELG YPVSNIPRNS 360 APDHYCGWCC LGCKDGKKKG TCETWLLDLV NSGNGAILPR CEVIKILHKR KSNRKAATGV 420 VFGFEYKGKK ELYVVESKVT IIACGALSSP PLLRRSGLKN PNIGRNLHLH PVTMAWGYFP 480 EAWPEVEKKS YEGGIMTAMS TVVANFDKSG YGAVIQTPSL HPGMFSSLMP WVSGADIKMQ 540 MCRYSRTAHI FALGRDKGSG TVNSPSSITY QMKAADEKNL QNGIEKILRI LAAAGAEEIG 600 THHCIGRRLN VKTASYHEFE KFVKEERARP MRDLSNQICS AHQMGSCRMG VNPKHSVVNQ 660 TGETWEIEGL YLADASVFPT ALGVNPMVTV QAIAYCTAQS VLEVLRRKKN |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02462 | pyranose_ox | 0.0003 | 642 | 705 | 64 | + pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation. | ||
| PRK02106 | PRK02106 | 2.0e-5 | 642 | 680 | 39 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 1.0e-22 | 575 | 695 | 123 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 5.0e-26 | 225 | 703 | 546 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 3.0e-51 | 254 | 472 | 222 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29206.1 | 0 | 8 | 705 | 82 | 644 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_193673.2 | 0 | 11 | 709 | 47 | 726 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 8 | 709 | 82 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 7 | 710 | 49 | 746 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519938.1 | 0 | 1 | 710 | 1 | 710 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.000003 | 194 | 699 | 8 | 518 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 1gpe_B | 0.00002 | 208 | 703 | 26 | 581 | A Chain A, Glucose Oxidase From Penicillium Amagasakiense |
| PDB | 1gpe_A | 0.00002 | 208 | 703 | 26 | 581 | A Chain A, Glucose Oxidase From Penicillium Amagasakiense |
| PDB | 1naa_B | 0.0002 | 208 | 475 | 4 | 283 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1naa_A | 0.0002 | 208 | 475 | 4 | 283 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
