Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29842.m003573 |
Family | AA1 |
Protein Properties | Length: 541 Molecular Weight: 61408.9 Isoelectric Point: 10.0594 |
Chromosome | Chromosome/Scaffold: 29842 Start: 340376 End: 344584 |
Description | SKU5 similar 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 30 | 496 | 0 |
TWKVTYGDIYPLGVKQQGILINGQFPGPQIDVVTNDNLIINVFNYLREPFLISWNGIQQRRNSWQDGVYGTNCPILPGRNFTYILQVKDQIGSYFYFPSL GMHKAAGGFGGIRVWSRPRIPVPFPPPSGDFTVLAGDWYKRNHYQLRRILDAGHDLPFPDGLLINGRGWNGYTFTVDPVKTYRFRISNVGLSTSINFRIQ GHKMKLVEVEGSHTLQNTYSALDIHLGQSYSVLVTADQPAKDYYIVVSTRFTARVLTTTAILHYSNSRDGVSGPIPGGPTTQIDWSLNQARSLRWNLTAS GPRPNPQGSYHYGLIKTSRTITLANSAPLINRKQRFAVNSVSFIPPDTPLKLADYFKIPGVFNLGSIPSYPTWGNAYLQTSVMSANFREFIEIIFQNWED SVQSWHIDGHSFFVVGMDGGQWTTASRARYNLRDAVARCTTQVYPKSWTAVYMALDNVGMWNIRSEN |
Full Sequence |
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Protein Sequence Length: 541 Download |
MRALYSLSAL LFLLFLIQSV NGENPYRFFT WKVTYGDIYP LGVKQQGILI NGQFPGPQID 60 VVTNDNLIIN VFNYLREPFL ISWNGIQQRR NSWQDGVYGT NCPILPGRNF TYILQVKDQI 120 GSYFYFPSLG MHKAAGGFGG IRVWSRPRIP VPFPPPSGDF TVLAGDWYKR NHYQLRRILD 180 AGHDLPFPDG LLINGRGWNG YTFTVDPVKT YRFRISNVGL STSINFRIQG HKMKLVEVEG 240 SHTLQNTYSA LDIHLGQSYS VLVTADQPAK DYYIVVSTRF TARVLTTTAI LHYSNSRDGV 300 SGPIPGGPTT QIDWSLNQAR SLRWNLTASG PRPNPQGSYH YGLIKTSRTI TLANSAPLIN 360 RKQRFAVNSV SFIPPDTPLK LADYFKIPGV FNLGSIPSYP TWGNAYLQTS VMSANFREFI 420 EIIFQNWEDS VQSWHIDGHS FFVVGMDGGQ WTTASRARYN LRDAVARCTT QVYPKSWTAV 480 YMALDNVGMW NIRSENWARQ YLGQQLYLRV YSPANSWRDE LPIPRNALLC GRARGRHTRP 540 L |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 17 | 538 | 522 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 20 | 538 | 519 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 20 | 535 | 524 | + copper ion binding / oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 17 | 538 | 525 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 25 | 534 | 521 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 27 | 531 | 4 | 539 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1asq_A | 0 | 27 | 531 | 4 | 539 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1asp_B | 0 | 27 | 531 | 4 | 539 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1asp_A | 0 | 27 | 531 | 4 | 539 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 1aso_B | 0 | 27 | 531 | 4 | 539 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |